Projects funded by the NCN

Structural and dynamical properties of a model outer membrane of Gram-negative bacteria

Call: OPUS 1 , Panel: NZ1

Principal investigator: dr Krzysztof Murzyn

Uniwersytet Jagielloński, Wydział Biochemii, Biofizyki i Biotechnologii

Modeling realistic tear film structure including tear protein and analyzing its role in stability and biophysical proper...

Call: PRELUDIUM 6 , Panel: ST7

Principal investigator: Alicja Wizert

Politechnika Wrocławska, Wydział Podstawowych Problemów Techniki

Hydration effects in protein kinases

Call: SONATA 6 , Panel: ST4

Principal investigator: dr Piotr Setny

Uniwersytet Warszawski, Centrum Nowych Technologii Uniwersytetu Warszawskiego

Design, parametrization and implementation of potentials of amino acid side chain interactions in water for application ...

Call: SONATA BIS 3 , Panel: ST4

Principal investigator: dr hab. Mariusz Makowski

Uniwersytet Gdański, Wydział Chemii

Simulation of conformational changes related to the interdomain communication in the eukaryotic GlcN-6-P synthase by mea...

Call: PRELUDIUM 5 , Panel: NZ2

Principal investigator: Aleksandra Miszkiel

Politechnika Gdańska, Wydział Chemiczny

Kerr response: experiment and molecular dynamics simulations on GPU with polarizable force field and explicit laser puls...

Call: PRELUDIUM 5 , Panel: ST4

Principal investigator: dr Kamil Polok

Uniwersytet Warszawski, Wydział Chemii

Kinesin in motion relatively to tubulin - properties of solvation water and interactions between proteins

Call: SONATA 5 , Panel: NZ1

Principal investigator: dr Anna Kuffel

Politechnika Gdańska, Wydział Chemiczny

Molecular simulations of ionic polymers nanostructures

Call: PRELUDIUM 4 , Panel: ST4

Principal investigator: Michał Dzięcielski

Uniwersytet im. Adama Mickiewicza w Poznaniu, Wydział Fizyki

Theoretical modeling of the solvent effect in ionic liquids: explicit solvent model

Call: OPUS 4 , Panel: ST4

Principal investigator: dr hab. Andrzej Eilmes

Uniwersytet Jagielloński, Wydział Chemii

Studies on the interaction between bioactive polymers and lipid membranes

Call: OPUS 4 , Panel: ST5

Principal investigator: dr hab. Mariusz Kępczyński

Uniwersytet Jagielloński, Wydział Chemii

Structure and properties of protein layers: from biomolecules to a functional layer (a combined experimental and simulat...

Call: OPUS 4 , Panel: ST5

Principal investigator: dr hab. Barbara Jachimska

Instytut Katalizy i Fizykochemii Powierzchni im. Jerzego Habera PAN

Steady states in confined microscopic systems: auxetic micro-slits and stimuli sensitive microgel particles in microchan...

Call: OPUS 3 , Panel: ST3

Principal investigator: dr hab. Arkadiusz Brańka

INSTYTUT FIZYKI MOLEKULARNEJ PAN

Interactions of peptide nucleic acids with biologically relevant RNA motifs

Call: OPUS 3 , Panel: NZ1

Principal investigator: dr hab. Joanna Trylska

Uniwersytet Warszawski, Centrum Nowych Technologii Uniwersytetu Warszawskiego

Molecular dynamics of different polymorphous of pharmacologically active substances

Call: OPUS 3 , Panel: ST3

Principal investigator: prof. Jan Wąsicki

Uniwersytet im. Adama Mickiewicza w Poznaniu, Wydział Fizyki

Dynamic heterogeneity of amorphous materials at ambient and elevated pressure

Call: MAESTRO 2 , Panel: ST3

Principal investigator: prof. Marian Paluch

Uniwersytet Śląski w Katowicach, Wydział Matematyki, Fizyki i Chemii

Novel class of chiral ionic liquids with menthyl substituent - synthesis, characterisation and computer modelling of sur...

Call: OPUS 1 , Panel: ST5

Principal investigator: dr Borys Szefczyk

Politechnika Wrocławska, Wydział Chemiczny

Insight into the function of post-translational modifications of proteins via large-size scale and long-scale molecular ...

Call: SONATA 19 , Panel: ST4

Principal investigator: dr Agnieszka Lipska

Politechnika Gdańska

Mechanisms of cytotoxicity and antibacterial activity of polycations

Call: OPUS 26 , Panel: ST5

Principal investigator: dr hab. Mariusz Kępczyński

Uniwersytet Jagielloński, Wydział Chemii

Impact of Composition and Cooling Rate on Mechanical Properties of High Entropy Metallic Glasses

Call: SONATA BIS 13 , Panel: ST3

Principal investigator: dr Silvia Bonfanti

Narodowe Centrum Badań Jądrowych

Optimization of coarse-grained molecular dynamics simulations for tunnel exploration of large proteins with buried activ...

Call: PRELUDIUM 22 , Panel: NZ2

Principal investigator: Nishita Mandal

Uniwersytet im. Adama Mickiewicza w Poznaniu, Wydział Biologii

Co-translational protein folding in the light of ribosome evolution

Call: POLONEZ BIS 3 , Panel: NZ1

Principal investigator: dr Tomasz Włodarski

Instytut Biochemii i Biofizyki Polskiej Akademii Nauk

Early-stage abrasive wear of crystalline and amorphous transition metal dichalcogenides

Call: OPUS 22 , Panel: ST5

Principal investigator: prof. Enrico Gnecco

Uniwersytet Jagielloński, Wydział Fizyki, Astronomii i Informatyki Stosowanej

Multi-scale method for amyloid fibril assembly using protofilament structures predicted by coarse-grained docking simula...

Call: OPUS 22 , Panel: NZ2

Principal investigator: dr Michał Koliński

Instytut Medycyny Doświadczalnej i Klinicznej im. Mirosława Mossakowskiego Polskiej Akademii Nauk

Statistical Learning of Slow Collective Variables from Atomistic Simulations

Call: SONATA 17 , Panel: ST4

Principal investigator: dr Jakub Rydzewski

Uniwersytet Mikołaja Kopernika w Toruniu, Wydział Fizyki, Astronomii i Informatyki Stosowanej

The influence of spatial organization of chromatin on morphology of eukaryotic cell nucleus

Call: POLONEZ BIS 1 , Panel: ST3

Principal investigator: dr Aykut Erbas

Uniwersytet Śląski w Katowicach

New graphene-based approach targeting the prion-like propagation of α-synuclein in Parkinson's disease.

Call: SONATA BIS 11 , Panel: NZ7

Principal investigator: dr hab. Małgorzata Kujawska

Uniwersytet Medyczny im. Karola Marcinkowskiego w Poznaniu

Functionalizations of the polyurethane surface toward enhancedesophageal stent functionality: Combined Experimental and ...

Call: PRELUDIUM 20 , Panel: ST5

Principal investigator: Paulina Chytrosz-Wróbel

Uniwersytet Jagielloński, Wydział Chemii

Functionalization of biomaterials surfaces by bioactive substances: from fundamentals to applications

Call: WEAVE-UNISONO , Panel: ST4

Principal investigator: prof. Andrzej Janusz Kotarba

Uniwersytet Jagielloński

Assessing protein-ligand complexes with ML/DL models trained on molecular dynamics-based descriptors.

Call: OPUS 20 , Panel: ST4

Principal investigator: dr hab. Paweł Siedlecki

Instytut Biochemii i Biofizyki Polskiej Akademii Nauk

Biomolecular condensates of galectin-3

Call: OPUS 20 , Panel: NZ1

Principal investigator: dr hab. Bartosz Różycki

Instytut Fizyki Polskiej Akademii Nauk

Ionic liquid mixtures for supercapacitor applications: Synergy of electrochemistry, NMR and simulations

Call: OPUS 20 (LAP) , Panel: ST3

Principal investigator: dr hab. Svyatoslav Kondrat

Instytut Chemii Fizycznej Polskiej Akademii Nauk

Making use of siderophore transport systems to deliver peptide nucleic acids to bacterial cells

Call: OPUS 19 , Panel: NZ1

Principal investigator: prof. Joanna Trylska

Uniwersytet Warszawski, Centrum Nowych Technologii Uniwersytetu Warszawskiego

Seeking for CB1 and CB2 receptor ligands among drugs, drug metabolites, and phytochemical compounds

Call: PRELUDIUM 18 , Panel: NZ7

Principal investigator: Adam Stasiulewicz

Uniwersytet Warszawski, Centrum Nowych Technologii Uniwersytetu Warszawskiego

Modified glycosaminoglycans as nanocarriers of bioactive substances

Call: OPUS 18 , Panel: ST5

Principal investigator: dr hab. Mariusz Kępczyński

Uniwersytet Jagielloński, Wydział Chemii

Exploring the sequence-structure relationship as a starting point for the design of DNA G-quadruplexes with a given topo...

Call: OPUS 18 , Panel: ST4

Principal investigator: dr hab. Jacek Czub

Politechnika Gdańska

Controlling Fluids with Surfactant: Multiscale Exploration of Topological Changes

Call: SONATA BIS 9 , Panel: ST3

Principal investigator: dr Panagiotis Theodorakis

Instytut Fizyki Polskiej Akademii Nauk

Multi-scale identification of strategies for the creation of high-strength biocomposites: Sea snail shells as a biomimet...

Call: OPUS 15 , Panel: ST8

Principal investigator: prof. Krzysztof Sztwiertnia

Instytut Metalurgii i Inżynierii Materiałowej im. Aleksandra Krupkowskiego Polskiej Akademii Nauk

Structures of oligomers of amyloid beta peptides: Multiscale molecular simulations.

Call: PRELUDIUM 14 , Panel: NZ1

Principal investigator: Dinh Quoc Huy Pham

Instytut Fizyki Polskiej Akademii Nauk

Increasing global and local accuracy of the coarse-grained UNRES model of proteins and its extensions to simulating very...

Call: OPUS 13 , Panel: ST4

Principal investigator: prof. Józef Liwo

Uniwersytet Gdański, Wydział Chemii

Application of ultrathin free-standing supports in chemical analysis of ultrathin organic layers.

Call: PRELUDIUM 12 , Panel: ST4

Principal investigator: dr Mikołaj Gołuński

Uniwersytet Jagielloński, Wydział Fizyki, Astronomii i Informatyki Stosowanej

The effect of crowded environment on the catalytic activity and dynamics of viral proteases

Call: OPUS 12 , Panel: NZ1

Principal investigator: prof. Joanna Trylska

Uniwersytet Warszawski, Centrum Nowych Technologii Uniwersytetu Warszawskiego

Hydrogen and proton transfer reactions as mechanisms for controlling electrical transport in single molecule junctions: ...

Call: HARMONIA 1 , Panel: ST2

Principal investigator: prof. Andrzej Sobolewski

Instytut Fizyki PAN

Mechanism of the discontinuous precipitation reaction - an atomistic simulation study

Call: SONATA 11 , Panel: ST8

Principal investigator: dr Marcela Trybuła

Instytut Metalurgii i Inżynierii Materiałowej im. Aleksandra Krupkowskiego Polskiej Akademii Nauk

Multi-domain proteins with disordered linkers in cellulose decomposition and cell adhesion

Call: OPUS 11 , Panel: NZ1

Principal investigator: dr Bartosz Różycki

Instytut Fizyki Polskiej Akademii Nauk

INNOvative antiSEPTic agents for a therapy with a broad spectrum of action

Call: OPUS 10 , Panel: NZ7

Principal investigator: dr Sebastian Kraszewski

Politechnika Wrocławska

Refinement of the OPLS-AA force field parameters for selected phospholipids on the basis of quantum-mechanical calculati...

Call: SONATA 9 , Panel: ST4

Principal investigator: dr Anna Wójcik-Augustyn

Uniwersytet Jagielloński, Wydział Biochemii, Biofizyki i Biotechnologii