Projects funded by the NCN

Structure-based dynamical models of large and complex biomolecular systems

Call: OPUS 8 , Panel: ST3

Principal investigator: prof. Marek Cieplak

Instytut Fizyki PAN

Simulation of conformational changes related to the interdomain communication in the eukaryotic GlcN-6-P synthase by mea...

Call: PRELUDIUM 5 , Panel: NZ2

Principal investigator: Aleksandra Miszkiel

Politechnika Gdańska, Wydział Chemiczny

A unified coarse-grained model of biological macromolecules based on mean-field multipole-multipole interactions

Call: MAESTRO 3 , Panel: ST4

Principal investigator: prof. Józef Liwo

Uniwersytet Gdański, Wydział Chemii

Coarse-grained modeling of carbohydrates

Call: OPUS 18 , Panel: ST4

Principal investigator: dr hab. Wojciech Płaziński

Instytut Katalizy i Fizykochemii Powierzchni im. Jerzego Habera Polskiej Akademii Nauk

Development of a new protein-protein docking method based on the flexible docking of short peptide fragments.

Call: OPUS 17 , Panel: NZ2

Principal investigator: dr Mateusz Kurciński

Uniwersytet Warszawski

Combining Rosetta method with deeply coarse grained SURPASS model into a novel multiscale algorithm for modeling protein...

Call: OPUS 15 , Panel: ST6

Principal investigator: dr hab. Dominik Gront

Uniwersytet Warszawski, Wydział Chemii

Mapping NARES-2P coarse-grained model of nucleic acids to all-atom representation

Call: PRELUDIUM 14 , Panel: ST4

Principal investigator: Łukasz Golon

Uniwersytet Gdański, Wydział Chemii

Increasing global and local accuracy of the coarse-grained UNRES model of proteins and its extensions to simulating very...

Call: OPUS 13 , Panel: ST4

Principal investigator: prof. Józef Liwo

Uniwersytet Gdański, Wydział Chemii

A coarse-grained method for RNA 3D structure modeling, with emphasis on non-canonical base pairing.

Call: OPUS 12 , Panel: ST6

Principal investigator: dr Michał Boniecki

Międzynarodowy Instytut Biologii Molekularnej i Komórkowej

Multi-domain proteins with disordered linkers in cellulose decomposition and cell adhesion

Call: OPUS 11 , Panel: NZ1

Principal investigator: dr Bartosz Różycki

Instytut Fizyki Polskiej Akademii Nauk

Modeling 3D structures and dynamics of RNA complexes with metal ions, with particular emphasis on the formation of non-c...

Call: SONATA 9 , Panel: NZ1

Principal investigator: dr Dorota Niedziałek

Instytut Biochemii i Biofizyki Polskiej Akademii Nauk

Global protein docking algorithms based on the UNRES coarse-grained model

Call: PRELUDIUM 9 , Panel: ST4

Principal investigator: dr Paweł Krupa

Uniwersytet Gdański, Wydział Chemii

A coarse-grained model of protein - nanoparticles interactions for simulating the transport of drug molecules to their t...

Call: PRELUDIUM 9 , Panel: ST4

Principal investigator: dr Magdalena Mozolewska

Uniwersytet Gdański, Wydział Chemii