Projects funded by the NCN

New and efficient methods for the flexible molecular docking of proteins.

Call: MAESTRO 6 , Panel: ST6

Principal investigator: prof. Andrzej Koliński

Uniwersytet Warszawski, Wydział Chemii

Structure and reactivity of avidin-like proteins

Call: OPUS 5 , Panel: ST4

Principal investigator: dr Jarosław Jan Panek

Uniwersytet Wrocławski, Wydział Chemii

Development of a tool for automatic evaluation of complexes of ligands with serotonin receptors based on the application...

Call: PRELUDIUM 5 , Panel: NZ2

Principal investigator: Sabina Marta Podlewska

Instytut Farmakologii im. Jerzego Maja Polskiej Akademii Nauk

New bioinformatics method for predicting ligand-binding sites in RNA structures

Call: PRELUDIUM 2 , Panel: NZ2

Principal investigator: dr Anna Philips

Uniwersytet im. Adama Mickiewicza w Poznaniu, Wydział Biologii

Theoretical prediction, chemical synthesis and biological analysis of a novel class of HSPA5 inhibitors

Call: OPUS 25 , Panel: ST4

Principal investigator: prof. Arkadiusz Chworoś

Centrum Badań Molekularnych i Makromolekularnych Polskiej Akademii Nauk

Allosteric regulation of cathepsins and procathepsins enzymatic activity by glycosaminoglycans and their mimetics

Call: SONATINA 7 , Panel: ST4

Principal investigator: dr Krzysztof Kamil Bojarski

Politechnika Gdańska, Wydział Chemiczny

New insights into the docking interactions between thioflavin T and misfolded proteins

Call: PRELUDIUM 2 , Panel: ST4

Principal investigator: Viktoria Babenko

Uniwersytet Warszawski, Wydział Chemii

Multi-scale method for amyloid fibril assembly using protofilament structures predicted by coarse-grained docking simula...

Call: OPUS 22 , Panel: NZ2

Principal investigator: dr Michał Koliński

Instytut Medycyny Doświadczalnej i Klinicznej im. Mirosława Mossakowskiego Polskiej Akademii Nauk

Blocking the TNF-TNFR2 interactions as a novel approach to the ovarian carcinoma treatment

Call: OPUS 21 , Panel: NZ7

Principal investigator: prof. Sylwia Anna Rodziewicz-Motowidło

Uniwersytet Gdański, Wydział Chemii

Integrative methods for modeling protein-protein complexes and multimolecular assemblies

Call: SHENG 2 , Panel: NZ2

Principal investigator: dr hab. Sebastian Kmiecik

Uniwersytet Warszawski, Centrum Nauk Biologiczno-Chemicznych

The influence of environment on biomolecular function, structure and interactions.

Call: SONATA BIS 10 , Panel: ST4

Principal investigator: dr hab. Piotr Mikołaj Setny

Uniwersytet Warszawski, Centrum Nowych Technologii Uniwersytetu Warszawskiego

Molecular mechanisms, signal transduction and inhibition of PEBP1-15LOX protein complex triggering the ferroptotic cell ...

Call: SONATA 15 , Panel: ST4

Principal investigator: dr hab. Karolina Anna Mikulska-Rumińska

Uniwersytet Mikołaja Kopernika w Toruniu, Wydział Fizyki, Astronomii i Informatyki Stosowanej

Development of a new protein-protein docking method based on the flexible docking of short peptide fragments.

Call: OPUS 17 , Panel: NZ2

Principal investigator: dr Mateusz Kurciński

Uniwersytet Warszawski

Computational insights into procathepsin maturation mediated by glycosaminoglycans.

Call: PRELUDIUM 16 , Panel: ST4

Principal investigator: Krzysztof Kamil Bojarski

Uniwersytet Gdański, Wydział Chemii

Modeling of glycosaminoglycan-induced formation of protein structure and enhancement of biologically relevant protein-li...

Call: SONATA BIS 8 , Panel: ST4

Principal investigator: dr Sergey Samsonov

Uniwersytet Gdański, Wydział Chemii

Combining Rosetta method with deeply coarse grained SURPASS model into a novel multiscale algorithm for modeling protein...

Call: OPUS 15 , Panel: ST6

Principal investigator: dr hab. Dominik Gront

Uniwersytet Warszawski, Wydział Chemii

Extension of the CABS-dock method for protein-peptide docking to modelling of membrane proteins

Call: PRELUDIUM 15 , Panel: NZ1

Principal investigator: Maciej Paweł Ciemny

Uniwersytet Warszawski, Wydział Chemii

Inhibitors, protein aggregation and carbon nanotube

Call: OPUS 1 , Panel: NZ1

Principal investigator: dr hab. Mai Suan Li

Instytut Fizyki Polskiej Akademii Nauk

Computational approaches to study protein-glycosaminoglycan interactions

Call: POLONEZ 2 , Panel: ST4

Principal investigator: dr Sergey Samsonov

Uniwersytet Gdański, Wydział Chemii

Global protein docking algorithms based on the UNRES coarse-grained model

Call: PRELUDIUM 9 , Panel: ST4

Principal investigator: dr Paweł Krupa

Uniwersytet Gdański, Wydział Chemii

Development of a method for the structure prediction of GPCRs complexes with agonists and antagonists, including the lig...

Call: SONATA 1 , Panel: NZ2

Principal investigator: dr Michał Koliński

Instytut Medycyny Doświadczalnej i Klinicznej im. Mirosława Mossakowskiego Polskiej Akademii Nauk