Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

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Three dimensional (3D) visualization of immediate-early genes (IEGs) structure upon activation, using a novel technique: electron microscopic 3D in situ hybridization.

2014/15/N/NZ2/00379

Keywords:

IEG gene structure bdnf fos in situ hybrydisation electron microscopy

Descriptors:

  • NZ2_5: Cell genetics
  • NZ3_5: Molecular neurobiology

Panel:

NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution :

Instytut Biologii Doświadczalnej im. M. Nenckiego PAN

woj. mazowieckie

Other projects carried out by the institution 

Principal investigator (from the host institution):

Paweł Trzaskoma 

Number of co-investigators in the project: 2

Call: PRELUDIUM 8 - announced on 2014-09-15

Amount awarded: 150 000 PLN

Project start date (Y-m-d): 2015-07-21

Project end date (Y-m-d): 2019-01-20

Project duration:: 42 months (the same as in the proposal)

Project status: Project settled

Information in the final report

  • Publication in academic press/journals (4)
  1. Nowoczesne techniki mikroskopowe w badaniach nad trójwymiarową strukturą chromatyny
    Authors:
    Trzaskoma P, Magalska A
    Academic press:
    Kosmos (rok: 2019, tom: 68, strony: 19-33), Wydawca: POLSKIE TOWARZYSTWO PRZYRODNIKÓW IM. KOPERNIKA
    Status:
    Published
    DOI:
    brak - link to the publication
  2. Blank spots on the map: some current questions on nuclear organization and genome architecture.
    Authors:
    Adriaens C, Serebryannyy LA, Feric M, Schibler A, Meaburn KJ, Kubben N, Trzaskoma P, Shachar S, Vidak S, Finn EH, Sood V, Pegoraro G, Misteli T
    Academic press:
    Histochem Cell Biol (rok: 2018, tom: 150(6), strony: 579-592), Wydawca: Springer Berlin Heidelberg
    Status:
    Published
    DOI:
    10.1007/s00418-018-1726-1 - link to the publication
  3. Ultrastructural visualization of 3D chromatin folding using volume electron microscopy and DNA in situ hybridization
    Authors:
    Paweł Trzaskoma, Błażej Ruszczycki, Byoungkoo Lee, Katarzyna K. Pels, Katarzyna Krawczyk, Grzegorz Bokota, Andrzej A. Szczepankiewicz, Jesse Aaron, Agnieszka Walczak, Małgorzata A. Śliwińska, Adriana Magalska, Michal Kadlof, Artur Wolny, Zofia Parteka, Sebastian Arabasz, Magdalena Kiss-Arabasz, Dariusz Plewczynski, Yijun Ruan, Grzegorz M. Wilczyński
    Academic press:
    Nature Communications (rok: 2020, tom: -, strony: -), Wydawca: Nature Publishing Group
    Status:
    Published
    DOI:
    10.1038/s41467-020-15987-2 - link to the publication
  4. Colocalization Colormap –an ImageJ Plugin for the Quantification and Visualization of Colocalized Signals
    Authors:
    Adam Gorlewicz, Katarzyna Krawczyk, Andrzej A. Szczepankiewicz, Pawel Trzaskoma, Christophe Mulle, Grzegorz M. Wilczynski
    Academic press:
    Neuroinformatics (rok: 2020, tom: -, strony: -), Wydawca: Springer
    Status:
    Published
    DOI:
    10.1007/s12021-020-09465-9 - link to the publication

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