Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

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New methodologies of solid state NMR spectroscopy in the structural studies and dynamics of selected proteins and peptides.

2014/13/B/ST4/03050

Keywords:

Solid State NMR NMR Crystallography Proteins Peptides Molecular Dynamics.

Descriptors:

  • ST4_3: Molecular architecture and structure
  • ST4_4: Theoretical and computational chemistry

Panel:

ST4 - Chemistry: physical chemistry/chemical physics, theoretical chemistry, analytical chemistry, inorganic chemistry, organic chemistry, method development

Host institution :

Centrum Badań Molekularnych i Makromolekularnych Polskiej Akademii Nauk

woj. łódzkie

Other projects carried out by the institution 

Principal investigator (from the host institution):

prof. Marek Potrzebowski 

Number of co-investigators in the project: 5

Call: OPUS 7 - announced on 2014-03-17

Amount awarded: 993 856 PLN

Project start date (Y-m-d): 2015-02-05

Project end date (Y-m-d): 2018-08-04

Project duration:: 42 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. Komputer stacjonarny z oprogramowaniem (Windows, Microsoft Office, GaussView, Corel) (4 000 PLN)
  2. Notebook z oprogramowaniem.
  3. BBLNA przedwzmacniacz (30 000 PLN)
  4. Komputer obliczeniowy (20 000 PLN)
  5. Sonda CP/MAS NMR - Ultra Fast MAS - 1,3 mm (200 000 PLN)

Information in the final report

  • Publication in academic press/journals (7)
  • Book publications / chapters in book publications (1)
  1. Accurate NMR determination of C–H or N–H distances for unlabeled molecules
    Authors:
    Y. Nishiyama, M. Malona, M.J. Potrzebowski, P. Paluch, J.P. Amoureux
    Academic press:
    Solid State Nuclear Magnetic Resonance (rok: 2016, tom: 73, strony: 15-21), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.ssnmr.2015.06.005 - link to the publication
  2. A Multi-Technique Experimental and Computational Approach To Study the Dehydration Processes in the Crystals of Endomorphin Opioid Peptide Derivative
    Authors:
    Marta K. Dudek, Tomasz Pawlak, Piotr Paluch, Agata Jeziorna, Marek J. Potrzebowski
    Academic press:
    Crystal Growth&Design (rok: 2016, tom: 16, strony: 5312−5322), Wydawca: ACS Publications
    Status:
    Published
    DOI:
    10.1021/acs.cgd.6b00831 - link to the publication
  3. Simple and Robust Study of Backbone Dynamics of Crystalline Proteins Employing 1H−15N Dipolar Coupling Dispersion
    Authors:
    P. Paluch, T. Pawlak, K. Ławniczak, J. Trébosc, O. Lafon, J-P Amoureux, M.J. Potrzebowski
    Academic press:
    The Journal of Physical Chemistry B (rok: 2018, tom: 122, strony: 8146-8156), Wydawca: ACS Publications
    Status:
    Published
    DOI:
    10.1021/acs.jpcb.8b04557 - link to the publication
  4. Analysis of local molecular motions of aromatic sidechains in proteins by 2D and 3D fast MAS NMR spectroscopy and quantum mechanical calculations
    Authors:
    Piotr Paluch, Tomasz Pawlak, Agata Jeziorna, Julien Trébosc, Guangjin Hou, Alexander J. Vega, Jean-Paul Amoureux, Martin Dracinsky, Tatyana Polenova, Marek J. Potrzebowski
    Academic press:
    Physical Chemistry Chemical Physics (rok: 2015, tom: 17, strony: 28789-28801), Wydawca: The Royal Society of Chemistry (RSC)
    Status:
    Published
    DOI:
    10.1039/C5CP04475H - link to the publication
  5. 1H-31P CPVC NMR method under Very Fast Magic Angle Spinning for analysis of dipolar interactions and dynamics processes in the crystalline phosphonium tetrafluoroborate salts
    Authors:
    P. Paluch, J Trebosc, J-P Amoureux, M.J. Potrzebowski
    Academic press:
    Solid State Nuclear Magnetic Resonance (rok: 2017, tom: 87, strony: 96-103), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.ssnmr.2017.05.004 - link to the publication
  6. Imaging the spatial distribution of radiofrequency field, sample and temperature in MAS NMR rotor
    Authors:
    H. Nagashima, J. Trebosc, O. Lafon, F. Pourpoint, P. Paluch, M.J. Potrzebowski , J-P Amoureux
    Academic press:
    Solid State Nuclear Magnetic Resonance (rok: 2017, tom: 87, strony: 137-142), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.ssnmr.2017.08.001 - link to the publication
  7. Theoretical study of CP-VC: A simple, robust and accurate MAS NMR method for analysis of dipolar C–H interactions under rotation speeds faster than ca. 60 kHz
    Authors:
    P. Paluch, J. Trébosc, Y. Nishiyama, M.J. Potrzebowski, M. Malon, J.P. Amoureux
    Academic press:
    Journal of Magnetic Resonance (rok: 2015, tom: 252, strony: 67-77), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.jmr.2015.01.002 - link to the publication
  1. Solid-State NMR Studies of Molecular Crystals
    Authors:
    M.K. Dudek, S. Kazmierski, M. Kostrzewa, M.J.Potrzebowski
    Book:
    Annual Reports on NMR Spectroscopy (rok: 2018, tom: 95, strony: 29587), Wydawca: Elsevier
    Status:
    Published

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