The role of the 5' non-coding regions of p53 mRNA transcripts, which are synthesized from various transcription promoters and use alternative initiation sites in generating p53 protein isoforms

2013/09/B/NZ1/01884

Keywords

Descriptors

  • NZ1_1: Biologia molekularna
  • NZ1_2: Biochemia
  • NZ1_4: Biologia strukturalna

Panel

NZ1 – Molecular biology, structural biology, biotechnology: molecular biology, structural biology, biotechnology

Host institution

Instytut Chemii Bioorganicznej PAN

Voivodeship: wielkopolskie

Other projects carried out by the institution »

Principal investigator (from the host institution)

prof. Jerzy Henryk Ciesiołka

Number of co-investigators in the project: 7

Call

OPUS 5 – announced on 2013-03-15

Amount awarded
798 000 PLN
Project start date
2014-02-13
Project end date
2017-08-12
Project duration
42 months (the same as in the proposal)
Project status
Project settled

Equipment purchased [PL]

  1. Komputer z drukarką. Cost: 6 000 PLN
  2. Wielofunkcyjny czytnik luminescencji, fluorescencji i absorbancji. Cost: 90 000 PLN

Information in the final report

Publication in academic press/journals (4)

  1. Variants of the 5′-terminal region of p53 mRNA influence the ribosomal scanning and translation efficiency

    Authors:
    Paulina Zydowicz-Machtel, Agata Swiatkowska, Łukasz Popenda, Agnieszka Gorska & Jerzy Ciesiołka
    Academic press:
    Scientific Reports (year: 2018, volume: 8, pages: 1533), Publisher: NATURE PUBLISHING GROUP, MACMILLAN BUILDING, 4 CRINAN ST, LONDON N1 9XW, ENGLAND
    Status:
    Published
    DOI:
    10.1038/s41598-018-20010-2 – link to the publication
  2. The role of the 5' terminal region of p53 mRNA in the p53 gene expression.

    Authors:
    A. Świątkowska, P. Żydowicz, J. Sroka, J. Ciesiołka.
    Academic press:
    Acta Biochimica Polonica (year: 2016, volume: 63(4), pages: 645-651), Publisher: Polskie Towarzystwo Biochemiczne, PAN: Komitet Biologii Molekularnej Komórki
    Status:
    Published
    DOI:
    10.18388/abp.2016_1342 – link to the publication
  3. The Role of Structural Elements of the 5'-Terminal Region of p53 mRNA in Translation under Stress Conditions Assayed by the Antisense Oligonucleotide Approach.

    Authors:
    A. Świątkowska, P. Żydowicz, A. Górska, J. Suchacka, M. Dutkiewicz, J. Ciesiołka
    Academic press:
    PLoS ONE (year: 2015, volume: 10(10), pages: e0141676), Publisher: San Francisco, California, and Cambridge, United Kingdom
    Status:
    Published
    DOI:
    10.1371/journal.pone.0141676 – link to the publication
  4. Length and secondary structure of the 5′ non-coding regions of mouse p53 mRNA transcripts - mouse as a model organism for p53 gene expression studies

    Authors:
    Joanna Szpotkowska, Agata Swiatkowska and Jerzy Ciesiołka
    Academic press:
    RNA Biology (year: 2019, volume: 16(1), pages: 25-41), Publisher: Taylor & Francis, Informa UK Limited, 5 Howick Place, London, SW1P 1WG
    Status:
    Published
    DOI:
    10.1080/15476286.2018.1556084 – link to the publication

Articles in post-conference publications (7)

  1. REGION NIEKODUJACY 5' mRNA GENU TP53 - STRUKTURA ORAZ ROLA W PROCESIE TRANSLACJI

    Authors:
    Jerzv Ciesiołka, Agata Swiątkowska, Paulina Żydowicz-Machtel, Joanna Sroka, Łukasz Popenda, Agnieszka Górska
    Conference:
    60. Zjazd Naukowy Polskiego Towarzystwa Chemicznego (year: 2017, pages: 246), Publisher: Polskie Towarzystwo Chemiczne
    Date:
    conference 17 - 21 wrzesień
    Status:
    Published
  2. Length of the 5' terminal region and structural context of the AUG1 start codon influence the ribosomal scanning and translation initiation of p53 mRNA.

    Authors:
    Paulina Żydowicz, Agata Świątkowska, Agnieszka Górska, Łukasz Popenda, Jerzy Ciesiołka
    Conference:
    EMBO Conference: Protein Synthesis and Translational Control (year: 2015, pages: p. 326), Publisher: EMBO
    Date:
    conference September 9-13
    Status:
    Published
  3. Length and secondary structure of the 5' non-coding regions of p53 mRNA transcripts influence the translation of p53 protein and its Δ41p53 isoform in mouse

    Authors:
    Joanna Sroka, Agnieszka Górska, Aleksandra Kasprowicz, Jerzy Ciesiołka
    Conference:
    The Complex life of mRNA (year: 2016, pages: p. 291), Publisher: EMBO
    Date:
    conference October 5-8
    Status:
    Published
  4. Identification and secondary structure characterization of the 5' non-coding regions of p53 mRNA transcripts in mouse

    Authors:
    Joanna Sroka, Agnieszka Górska, Aleksandra Kasprowicz, Jerzy Ciesiołka
    Conference:
    2nd Congress BIO2016 Expanding beyond the limits (year: 2016, pages: p. 140), Publisher: Polskie Towarzystwo Biochemiczne, PAN: Komitet Biologii Molekularnej Komórki
    Date:
    conference September 13-16
    Status:
    Published
  5. Variants of the S'-terminal region of p53 mRNA influence the ribosomal scanning and translation efficiency

    Authors:
    Zvdowicz-Machtel P, Swiatkowska A, Popenda L, G6rska A, Ciesiolka J
    Conference:
    RNAtion: Computational and Experimental RNA Biology Conference for Young Scientists (year: 2017, pages: 40), Publisher: Adam Mickiewicz University in Poznań, Poland
    Date:
    conference 18 - 19 September
    Status:
    Published
  6. The role of structural elements of the 5'-terminal region of p53 mRNA in translation under stress conditions assayed by the antisense oligonucleotide approach.

    Authors:
    Agata Świątkowska, Paulina Żydowicz, Agnieszka Górska, Julia Suchacka, Mariola Dutkiewicz, Jerzy Ciesiołka
    Conference:
    RNA 2015: The Twentieth Annual Meeting of the RNA Society (year: 2015, pages: P 587), Publisher: The RNA Society
    Date:
    conference May 26–31
    Status:
    Published
  7. Length of 5'UTR and structural context of AUG1 codon influence translation initiation of p53 mRNA.

    Authors:
    Paulina Żydowicz, Agata Świątkowska, Agnieszka Górska, Łukasz Popenda, Jerzy Ciesiołka
    Conference:
    EMBO Young Scientists' Forum (year: 2015, pages: p. 218), Publisher: EMBO
    Date:
    conference July 1-3
    Status:
    Published

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