Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Sparse and approximately-sparse representations in problems of NMR spectroscopy

2012/07/E/ST4/01386

Keywords:

compressed sensing nuclear magnetic resonance spectroscopy sparse representations

Descriptors:

  • ST1_18: Control theory and optimisation
  • ST1_16: Numerical analysis

Panel:

ST4 - Chemistry: physical chemistry/chemical physics, theoretical chemistry, analytical chemistry, inorganic chemistry, organic chemistry, method development

Host institution :

Uniwersytet Warszawski, Centrum Nowych Technologii Uniwersytetu Warszawskiego

woj. mazowieckie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr hab. Krzysztof Kazimierczuk 

Number of co-investigators in the project: 5

Call: SONATA BIS 2 - announced on 2012-09-15

Amount awarded: 1 423 600 PLN

Project start date (Y-m-d): 2013-07-11

Project end date (Y-m-d): 2018-12-10

Project duration:: 65 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. Serwer NAS.
  2. Licencja programu Mnova.
  3. Komputer wieloprocesorowy (30 000 PLN)

Information in the final report

  • Publication in academic press/journals (19)
  • Book publications / chapters in book publications (1)
  1. Criteria for sensitivity enhancement by compressed sensing: practical application to anisotropic NAD 2D-NMR spectroscopy.
    Authors:
    Kazimierczuk, Krzysztof Lafon, Olivier Lesot, Philippe
    Academic press:
    The Analyst (rok: 2014, tom: 139, strony: 2702-13), Wydawca: ROYAL SOC CHEMISTRY, THOMAS GRAHAM HOUSE, SCIENCE PARK, MILTON RD, CAMBRIDGE CB4 0WF, CAMBS, ENGLAND
    Status:
    Published
    DOI:
    10.1039/c4an00381k - link to the publication
  2. Enabling Fast Pseudo-2D NMR Spectral Acquisition for Broadband Homonuclear Decoupling: The EXACT NMR Approach
    Authors:
    Ndukwe, I.E., Shchukina A., Zorin V., Cobas C., Kazimierczuk K. and Butts C.P.
    Academic press:
    ChemPhysChem (rok: 2017, tom: 18, strony: 2081-2087), Wydawca: WILEY-V C H VERLAG GMBH, POSTFACH 101161, 69451 WEINHEIM, GERMANY
    Status:
    Published
    DOI:
    10.1002/cphc.201700474 - link to the publication
  3. Fast 2D NMR spectroscopy for in vivo monitoring of bacterial metabolism in complex mixtures
    Authors:
    Dass, R., Grudziaz, K., Ishikawa, T., Nowakowski M., Dębowska, R., Kazimierczuk, K.
    Academic press:
    Frontiers in Microbiology (rok: 2017, tom: 8, strony: ---), Wydawca: FRONTIERS MEDIA SA, PO BOX 110, EPFL INNOVATION PARK, BUILDING I, LAUSANNE, 1015, SWITZERLAND
    Status:
    Published
    DOI:
    10.3389/fmicb.2017.01306 - link to the publication
  4. Non-uniform sampling: post-Fourier era of NMR data collection and processing
    Authors:
    K. Kazimierczuk and V.Y. Orekhov
    Academic press:
    Magnetic Resonance in Chemistry (rok: 2015, tom: 53, strony: 921-926), Wydawca: Wiley-Blackwell
    Status:
    Published
    DOI:
    10.1002/mrc.4284 - link to the publication
  5. The Quest for Simplicity: Remarks on the Free-Approach Models
    Authors:
    Ł. Jaremko, M. Jaremko, M. Nowakowski and A. Ejchart
    Academic press:
    J. Phys. Chem. B (rok: 2015, tom: 119, strony: 11978-11987), Wydawca: AMER CHEMICAL SOC
    Status:
    Published
    DOI:
    10.1021/acs.jpcb.5b07181 - link to the publication
  6. The causality principle in the reconstruction of sparse NMR spectra.
    Authors:
    Mayzel, M Kazimierczuk, K Orekhov, V Yu
    Academic press:
    Chemical communications (Cambridge, England) (rok: 2014, tom: 50, strony: 8947-50), Wydawca: ROYAL SOC CHEMISTRY, THOMAS GRAHAM HOUSE, SCIENCE PARK, MILTON RD, CAMBRIDGE CB4 0WF, CAMBS, ENGLAND
    Status:
    Published
    DOI:
    10.1039/c4cc03047h - link to the publication
  7. Alternative data processing techniques for serial NMR experiments
    Authors:
    Alexandra Shchukina, Mateusz Urbanczyk, Paweł Kasprzak, Krzysztof Kazimierczuk
    Academic press:
    Concepts in Mag netic Resonance A (rok: 2018, tom: 46A, strony: e21429), Wydawca: Wiley
    Status:
    Published
    DOI:
    10.1002/cmr.a.21429 - link to the publication
  8. Analysis of Complex Reacting Mixtures by Time-Resolved 2D NMR
    Authors:
    Dass, Rupashree Koźmiński, Wiktor Kazimierczuk, Krzysztof
    Academic press:
    Analytical Chemistry (rok: 2015, tom: 87, strony: 1337-1343), Wydawca: AMER CHEMICAL SOC, 1155 16TH ST, NW, WASHINGTON, DC 20036 USA
    Status:
    Published
    DOI:
    10.1021/ac504114h - link to the publication
  9. Modified OMP Algorithm for Exponentially Decaying Signals
    Authors:
    Kazimierczuk, Krzysztof Kasprzak, Paweł
    Academic press:
    Sensors (rok: 2015, tom: 15, strony: 234-247), Wydawca: MDPI AG, POSTFACH, CH-4005 BASEL, SWITZERLAND
    Status:
    Published
    DOI:
    10.3390/s150100234 - link to the publication
  10. Fast acquisition of multidimensional NMR spectra of solids and mesophases using alternative sampling methods
    Authors:
    P. Lesot, K. Kazimierczuk, J. Trébosc, J.-P. Amoureux and O. Lafon
    Academic press:
    Magnetic Resonance in Chemistry (rok: 2015, tom: 53, strony: 927-939), Wydawca: Wiley-Blackwell
    Status:
    Published
    DOI:
    10.1002/mrc.4290 - link to the publication
  11. Pitfalls in compressed sensing reconstruction and how to avoid them
    Authors:
    Alexandra Shchukina, Paweł Kasprzak, Rupashree Dass, Michał Nowakowski, Krzysztof Kazimierczuk
    Academic press:
    Journal of Biomolecular NMR (rok: 2017, tom: 68, strony: 79–98), Wydawca: Springer
    Status:
    Published
    DOI:
    0.1007/s10858-016-0068-3 - link to the publication
  12. Rapid and safe ASAP acquisition with EXACT NMR
    Authors:
    Ndukwe, Ikenna, Shchukina, Alexandra, Kazimierczuk, Krzysztof and Butts, Criag
    Academic press:
    Chemical Communications (rok: 2016, tom: 52, strony: 12769-12772), Wydawca: Royal Society of Chemistry
    Status:
    Published
    DOI:
    10.1039/C6CC07140F - link to the publication
  13. Artifacts in time-resolved NUS: A case study of NOE build-up curves from 2D NOESY
    Authors:
    R. Dass, P. Kasprzak, W. Koźmiński and K. Kazimierczuk
    Academic press:
    Journal of Magnetic Resonance (rok: 2016, tom: 265, strony: 108-116), Wydawca: ACADEMIC PRESS INC ELSEVIER SCIENCE
    Status:
    Published
    DOI:
    10.1016/j.jmr.2016.01.025 - link to the publication
  14. Backbone Assignment of the MALT1 Paracaspase by Solution NMR
    Authors:
    S. Unnerståle, M. Nowakowski, V. Baraznenok, G. Stenberg, J. Lindberg, M. Mayzel, V. Orekhov, T. Agback
    Academic press:
    PLOSOne (rok: 2016, tom: -, strony: -), Wydawca: PLOS
    Status:
    Published
    DOI:
    10.1371/journal.pone.0146496 - link to the publication
  15. Monitoring polydispersity by NMR diffusometry with tailored norm regularisation and moving-frame processing
    Authors:
    M. Urbańczyk, D. Bernin, A. Czuroń and K. Kazimierczuk
    Academic press:
    Analyst (rok: 2016, tom: 141, strony: 1745-1752), Wydawca: ROYAL SOC CHEMISTRY, THOMAS GRAHAM HOUSE, SCIENCE PARK, MILTON RD, CAMBRIDGE CB4 0WF, CAMBS, ENGLAND
    Status:
    Published
    DOI:
    10.1039/C5AN02304A - link to the publication
  16. Quick, sensitive serial NMR experiments with Radon transform
    Authors:
    Dass, R., Kasprzak P., Kazimierczuk K.
    Academic press:
    JOURNAL OF MAGNETIC RESONANCE (rok: 2017, tom: 282, strony: 114-118), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.jmr.2017.07.011 - link to the publication
  17. Accelerating Diffusion-Ordered NMR Spectroscopy by Joint Sparse Sampling of Diffusion and Time Dimensions
    Authors:
    Urbańczyk, Mateusz Koźmiński, Wiktor Kazimierczuk, Krzysztof
    Academic press:
    Angewandte Chemie International Edition (rok: 2014, tom: 126, strony: 6582-6585), Wydawca: Wiley
    Status:
    Published
    DOI:
    10.1002/ange.201402049 - link to the publication
  18. EXtended ACquisition Time (EXACT) NMR—A Case for ′Burst′ Non-Uniform Sampling
    Authors:
    Ndukwe, Ikenna, Shchukina, Alexandra, Kazimierczuk, Krzysztof, Cobas, Carlos and Butts, Criag
    Academic press:
    ChemPhysChem (rok: 2016, tom: 17, strony: 2799–2803), Wydawca: Wiley
    Status:
    Published
    DOI:
    10.1002/cphc.201600541 - link to the publication
  19. Joint non-uniform sampling of all incremented time delays for quicker acquisition in protein relaxation studies
    Authors:
    Urbańczyk, M., Nowakowski, M., Koźmiński, W., Kazimierczuk, K.
    Academic press:
    Journal of Biomolecular NMR (rok: 2017, tom: 68(2), strony: 155-161), Wydawca: Springer
    Status:
    Published
    DOI:
    10.1007/s10858-017-0115-8 - link to the publication
  1. Compressed Sampling in NMR Spectroscopy
    Authors:
    Krzysztof Kazimierczuk
    Book:
    eMagRes (rok: 2018, tom: 7, strony: 45299), Wydawca: Wiley
    Status:
    Published

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