Projects funded by the NCN

Development of a method for the structure prediction of GPCRs complexes with agonists and antagonists, including the lig...

Call: SONATA 1 , Panel: NZ2

Principal investigator: dr Michał Koliński

Instytut Medycyny Doświadczalnej i Klinicznej im. Mirosława Mossakowskiego PAN

Structure prediction of proteins and large protein assemblies guided by low-resolution or/and sparse experimental data.

Call: SONATA 1 , Panel: NZ2

Principal investigator: dr Dominik Gront

Uniwersytet Warszawski, Wydział Chemii

Identification and comprehensive classification of nucleases including human nucleases

Call: OPUS 8 , Panel: NZ1

Principal investigator: dr hab. Krzysztof Ginalski

Uniwersytet Warszawski, Centrum Nowych Technologii Uniwersytetu Warszawskiego

Revisiting the approaches for isotope effects prediction in condensed phase

Call: SONATA BIS 4 , Panel: ST4

Principal investigator: dr hab. Agnieszka Dybała-Defratyka

Politechnika Łódzka, Wydział Chemiczny

An integrated approach to the prediction of the structures of proteins and protein complexes with the use of the coarse-...

Call: HARMONIA 5 , Panel: ST4

Principal investigator: prof. Józef Liwo

Uniwersytet Gdański, Wydział Chemii

Consistent and scalable learning algorithms for structured output prediction

Call: SONATA 5 , Panel: ST6

Principal investigator: dr Krzysztof Dembczyński

Politechnika Poznańska, Wydział Informatyki

Conserved RNA structural motifs in influenza virus: toward revealing viral RNA functions

Call: HARMONIA 4 , Panel: NZ1

Principal investigator: dr hab. Elżbieta Kierzek

Instytut Chemii Bioorganicznej PAN

Influence of knotted structure on function of proteins and protein structure prediction

Call: SONATA BIS 2 , Panel: NZ1

Principal investigator: dr hab. Joanna Sułkowska

Uniwersytet Warszawski, Centrum Nowych Technologii Uniwersytetu Warszawskiego

Bioinformatic analysis of GmrSD, a Type IV Modification-Dependent Restriction Systems

Call: PRELUDIUM 4 , Panel: NZ2

Principal investigator: Magdalena Machnicka

Międzynarodowy Instytut Biologii Molekularnej i Komórkowej

Computer aided design and prediction of properties of drug delivery systems based on carbon nanotubes architecture

Call: SONATA BIS 2 , Panel: ST4

Principal investigator: dr hab. Tomasz Pańczyk

Instytut Katalizy i Fizykochemii Powierzchni im. Jerzego Habera PAN

Analysis of the structure of regulatory sequences and prediction of gene expression dynamics.

Call: PRELUDIUM 3 , Panel: NZ2

Principal investigator: dr Marta Iwanaszko

Politechnika Śląska, Wydział Automatyki, Elektroniki i Informatyki

Prediction of Cascade complex structure.

Call: PRELUDIUM 3 , Panel: NZ2

Principal investigator: dr Joanna Kasprzak

Uniwersytet im. Adama Mickiewicza w Poznaniu, Wydział Biologii

Structural RNomics

Call: MAESTRO 2 , Panel: NZ2

Principal investigator: prof. Janusz Bujnicki

Międzynarodowy Instytut Biologii Molekularnej i Komórkowej

New bioinformatics method for predicting ligand-binding sites in RNA structures

Call: PRELUDIUM 2 , Panel: NZ2

Principal investigator: dr Anna Philips

Uniwersytet im. Adama Mickiewicza, Wydział Biologii

Evaluation of cardiac and peripheral arteries structure and properties for predicting cardiovascular complications in pa...

Call: OPUS 2 , Panel: NZ7

Principal investigator: prof. Andrzej Wykrętowicz

Uniwersytet Medyczny im. Karola Marcinkowskiego w Poznaniu, Wydział Lekarski I

Computational design of next generation rocket fuels based on hypergolic metal-organic frameworks

Call: OPUS 26 , Panel: ST5

Principal investigator: dr hab. Mihails Arhangelskis

Uniwersytet Warszawski, Wydział Chemii

Theoretical prediction, chemical synthesis and biological analysis of a novel class of HSPA5 inhibitors

Call: OPUS 25 , Panel: ST4

Principal investigator: prof. Arkadiusz Chworoś

Centrum Badań Molekularnych i Makromolekularnych Polskiej Akademii Nauk

Machine learning and advanced NMR crystallography - complementary tools for optimizing the pathways of synthesis, predic...

Call: OPUS 24 (LAP) , Panel: ST4

Principal investigator: prof. Marek Potrzebowski

Centrum Badań Molekularnych i Makromolekularnych Polskiej Akademii Nauk

Computational design of magnetic metal-organic frameworks using ab initio crystal structure prediction

Call: PRELUDIUM BIS 4 , Panel: ST5

Principal investigator: dr hab. Mihails Arhangelskis

Uniwersytet Warszawski, Wydział Chemii

Towards understanding of polymorphism and crystallization pathways of organic molecular crystals

Call: SONATA BIS 12 , Panel: ST4

Principal investigator: dr hab. Marta Dudek

Centrum Badań Molekularnych i Makromolekularnych Polskiej Akademii Nauk

Degradation processes of mechanically loaded structures in hydrogen environment

Call: OPUS 23 , Panel: ST8

Principal investigator: dr hab. Magdalena Mieloszyk

Instytut Maszyn Przepływowych im. Roberta Szewalskiego Polskiej Akademii Nauk

Biological code of knots – identification of knotted patterns in biomolecules via AI approach

Call: OPUS 22 (LAP) , Panel: NZ1

Principal investigator: dr hab. Joanna Sułkowska

Uniwersytet Warszawski, Centrum Nowych Technologii Uniwersytetu Warszawskiego

Multi-scale method for amyloid fibril assembly using protofilament structures predicted by coarse-grained docking simula...

Call: OPUS 22 , Panel: NZ2

Principal investigator: dr Michał Koliński

Instytut Medycyny Doświadczalnej i Klinicznej im. Mirosława Mossakowskiego Polskiej Akademii Nauk

Fatigue behavior and life assessment of CFRP structures under global non-proportional multiaxial loading conditions

Call: PRELUDIUM 20 , Panel: ST8

Principal investigator: Szymon Duda

Politechnika Wrocławska

Predicting 3D RNA structures using Generative Adversarial Networks

Call: PRELUDIUM BIS 2 , Panel: ST6

Principal investigator: prof. Marta Szachniuk

Politechnika Poznańska, Wydział Informatyki i Telekomunikacji

Towards automatic derivation of geometry-based descriptors as surrogates for complex structural approaches in enzyme-sub...

Call: PRELUDIUM 19 , Panel: NZ2

Principal investigator: Carlos Sequeiros Borja

Uniwersytet im. Adama Mickiewicza w Poznaniu, Wydział Biologii

To what extent the transcriptomic response in the events initiating lung toxicity in mice depends on the structural feat...

Call: OPUS 19 , Panel: ST5

Principal investigator: prof. Tomasz Puzyn

Uniwersytet Gdański, Wydział Chemii

Theoretical design and prediction of phosphorescent emissive materials based on halogen bonding interactions and experim...

Call: OPUS 19 , Panel: ST5

Principal investigator: dr Mihails Arhangelskis

Uniwersytet Warszawski, Wydział Chemii

Identification and comprehensive classification of peptidases

Call: SONATA 15 , Panel: NZ2

Principal investigator: dr Kamil Steczkiewicz

Instytut Biochemii i Biofizyki Polskiej Akademii Nauk

Thermodynamic parameters and rules towards the determination of RNA folding in in vivo-like conditions. RNA folding pred...

Call: OPUS 17 , Panel: ST4

Principal investigator: prof. Ryszard Kierzek

Instytut Chemii Bioorganicznej Polskiej Akademii Nauk

Ab initio prediction of structures and properties of metal-organic frameworks for sensor applications

Call: SONATA 14 , Panel: ST5

Principal investigator: dr Mihails Arhangelskis

Uniwersytet Warszawski, Wydział Chemii

Vector Error Correction models with time-varying covariance structure in Bayesian analysis and prediction of macroeconom...

Call: OPUS 16 , Panel: HS4

Principal investigator: dr hab. Anna Pajor

Uniwersytet Ekonomiczny w Krakowie, Kolegium Ekonomii, Finansów i Prawa

Crystal structure prediction (CSP) and NMR crystallography as modern tools for the determination of crystal structures o...

Call: SONATA 14 , Panel: ST4

Principal investigator: dr hab. Marta Dudek

Centrum Badań Molekularnych i Makromolekularnych Polskiej Akademii Nauk

Prediction of protein and peptide isoelectric point based on sequence and structure features

Call: OPUS 15 , Panel: NZ2

Principal investigator: dr Łukasz Kozłowski

Uniwersytet Warszawski, Wydział Matematyki, Informatyki i Mechaniki

Using transcriptomic data for identification of new miRNAs and prediction of miRNA gene structures

Call: PRELUDIUM 1 , Panel: NZ2

Principal investigator: dr Michał Szcześniak

Uniwersytet im. Adama Mickiewicza, Wydział Biologii

Towards accurate prediction of spin-state energetics for transition metal complexes in quantum-chemical calculations

Call: SONATA 13 , Panel: ST4

Principal investigator: dr hab. Mariusz Radoń

Uniwersytet Jagielloński, Wydział Chemii

Predicting affinity of ligands to RNA. The case of an aminoglycoside-sensing riboswitch.

Call: HARMONIA 9 , Panel: NZ1

Principal investigator: prof. Joanna Trylska

Uniwersytet Warszawski, Centrum Nowych Technologii Uniwersytetu Warszawskiego

An integrated approach to modeling protein structure and dynamics based on the UNRES coarse-grained force field and bioi...

Call: HARMONIA 9 , Panel: ST4

Principal investigator: dr hab. Cezary Czaplewski

Uniwersytet Gdański, Wydział Chemii

Increasing global and local accuracy of the coarse-grained UNRES model of proteins and its extensions to simulating very...

Call: OPUS 13 , Panel: ST4

Principal investigator: prof. Józef Liwo

Uniwersytet Gdański, Wydział Chemii

Developement of new methods for designing RNA molecules that fold into desired spatial structures and their use for deve...

Call: OPUS 13 , Panel: NZ2

Principal investigator: prof. Janusz Bujnicki

Międzynarodowy Instytut Biologii Molekularnej i Komórkowej

Efficient extreme classification algorithms based on reduction to structured prediction problems

Call: PRELUDIUM 13 , Panel: ST6

Principal investigator: Kalina Kobus

Politechnika Poznańska, Wydział Informatyki

Methodology of prediction of residual strength of composite structures based on ultrasonic testing supported by numerica...

Call: PRELUDIUM 13 , Panel: ST8

Principal investigator: dr Angelika Wronkowicz

Politechnika Śląska, Wydział Mechaniczny Technologiczny

Predicting the structure of boron and boron-related nanowires by using first-principles based evolutionary search algori...

Call: OPUS 12 , Panel: ST3

Principal investigator: dr Nevill Gonzalez Szwacki

Uniwersytet Warszawski, Wydział Fizyki

3D hybrid organ-on-chip (hOCP) platform for skeletal muscle tissue: a predictive in vitro model and an advanced tool for...

Call: POLONEZ 3 , Panel: NZ1

Principal investigator: dr Marco Costantini

Instytut Chemii Fizycznej Polskiej Akademii Nauk

RNA structure prediction based on modeling the target sequence and homologous sequences

Call: PRELUDIUM 9 , Panel: NZ2

Principal investigator: Marcin Magnus

Międzynarodowy Instytut Biologii Molekularnej i Komórkowej