Projects funded by the NCN
Spatial gene expression analysis of FFPE breast cancer undercovers potential of well-preserved samples to identify regulatory cascades and cellular context
2021/41/N/NZ4/02317
Keywords:
Spatial analysis genes expression breast cancer FFPE samples Visium Spatial Gene Expression
Descriptors:
- NZ4_5: Anatomical pathology
- NZ2_2: Genomics, transcriptomics, epigenomics
Panel:
NZ4 - Biology of tissues, organs and organisms: morphology and functions of animal's and human's systems, organs and organisms, experimental medicine, basics of neurology
Principal investigator (from the host institution):
Number of co-investigators in the project: 2
Call: PRELUDIUM 20 - announced on 2021-03-15
Amount awarded: 209 840 PLN
Project start date (Y-m-d): 2022-02-04
Project end date (Y-m-d): 2025-02-03
Project duration:: 36 months (the same as in the proposal)
Project status: Project completed
Project description
Download the project description in a pdf file
Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.
Information in the final report
- Publication in academic press/journals (2)
- Integration of single-cell RNA sequencing and spatial transcriptomics to reveal the glioblastoma heterogeneityAuthors:Adrian Perdyan, Urszula Lawrynowicz, Monika Horbacz, Bozena Kaminska, Jakub MieczkowskiAcademic press:F1000Research (rok: 2022, tom: 11, strony: 1180), Wydawca: F1000 Research LtdStatus:PublishedDOI:10.12688/f1000research.126243.1 - link to the publication
- Integration of single-cell RNA sequencing and spatial transcriptomics to reveal the glioblastoma heterogeneityAuthors:Adrian Perdyan, Urszula Lawrynowicz, Monika Horbacz, Bozena Kaminska, Jakub MieczkowskiAcademic press:F1000Research (rok: 2022, tom: 11, strony: 1180), Wydawca: F1000 Research LtdStatus:PublishedDOI:10.12688/f1000research.126243.1 - link to the publication