Projects funded by the NCN
A novel probabilistic model for cell type identification in spatial transcriptomics and single-cell RNA sequencing data
2021/41/N/ST6/03619
Keywords:
probabilistic graphical models Markov chain Monte Carlo transcriptomics
Descriptors:
- ST6_011:
- ST6_013:
- ST1_017:
Panel:
ST6 - Computer science and informatics: informatics and information systems, computer science, scientific computing, intelligent systems
Host institution :
Uniwersytet Warszawski, Wydział Matematyki, Informatyki i Mechaniki
woj. mazowieckie
Principal investigator (from the host institution):
Number of co-investigators in the project: 2
Call: PRELUDIUM 20 - announced on 2021-03-15
Amount awarded: 67 344 PLN
Project start date (Y-m-d): 2022-01-12
Project end date (Y-m-d): 2024-01-11
Project duration:: 24 months (the same as in the proposal)
Project status: Project settled
Project description
Download the project description in a pdf file
Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.
Information in the final report
- Publication in academic press/journals (2)
- Integrative Spatial and Genomic Analysis of Tumor Heterogeneity with TumoroscopeAuthors:Shadi Shafighi, Agnieszka Geras, Barbara Jurzysta, Alireza Sahaf Naeini, Igor Filipiuk, Alicja Rączkowska, Hosein Toosi, Łukasz Koperski, Kim Thrane, Camilla Engblom, Jeff E Mold, Xinsong Chen, Johan Hartman, Dominika Nowis, Alessandra Carbone, Jens Lagergren, Ewa SzczurekStatus:Accepted for publication
- Integrative Spatial and Genomic Analysis of Tumor Heterogeneity with TumoroscopeAuthors:Shadi Shafighi, Agnieszka Geras, Barbara Jurzysta, Alireza Sahaf Naeini, Igor Filipiuk, Alicja Rączkowska, Hosein Toosi, Łukasz Koperski, Kim Thrane, Camilla Engblom, Jeff E Mold, Xinsong Chen, Johan Hartman, Dominika Nowis, Alessandra Carbone, Jens Lagergren, Ewa SzczurekStatus:Accepted for publication