Projects funded by the NCN
Extended microbiome characterization by the exploitation of the microbial intra-community synergies -- towards better understanding of the Exposome.
2020/38/E/NZ2/00598
Keywords:
microbiome exposome bioinformatics machine learning
Descriptors:
- NZ2_007:
- ST6_013:
- NZ2_002:
Panel:
NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology
Host institution :
Uniwersytet Jagielloński, Małopolskie Centrum Biotechnologii Uniwersytetu Jagiellońskiego
woj. małopolskie
Principal investigator (from the host institution):
Number of co-investigators in the project: 9
Call: SONATA BIS 10 - announced on 2020-07-29
Amount awarded: 2 784 522 PLN
Project start date (Y-m-d): 2021-05-05
Project end date (Y-m-d): 2026-01-04
Project duration:: 56 months (the same as in the proposal)
Project status: Project completed
Project description
Download the project description in a pdf file
Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.
Information in the final report
- Publication in academic press/journals (3)
- Gut microbiome dynamics and predictive value in hospitalized COVID-19 patients: a comparative analysis of shallow and deep shotgun sequencingAuthors:Kopera K, Gromowski T, Wydmański W, Skonieczna-Żydecka K, Muszyńska A, Zielińska K, Wierzbicka-Woś A, Kaczmarczyk M, Kadaj-Lipka R, Cembrowska-Lech D, Januszkiewicz K, Kotfis K, Witkiewicz W, Nalewajska M, Feret W, Marlicz W, Łoniewski I, Łabaj PP, Rydzewska G and Kosciolek TAcademic press:Frontier in Microbiology (rok: 2024, tom: 15, strony: 1342749), Wydawca: FrontiersStatus:PublishedDOI:10.3389/fmicb.2024.1342749 - link to the publication
- HCS—hierarchical algorithm for simulation of omics datasetsAuthors:Piotr Stomma, Witold R RudnickiAcademic press:Bioinformatics (rok: 2024, tom: 40, Issue Supplement 2, strony: ii98–ii104), Wydawca: OUPStatus:PublishedDOI:10.1093/bioinformatics/btae392 - link to the publication
- Adaptation to space conditions of novel bacterial species isolated from the International Space Station revealed by functional gene annotations and comparative genome analysisAuthors:Lukasz M. Szydlowski, Alper A. Bulbul, Anna C. Simpson, Deniz E. Kaya, Nitin K. Singh, Ugur O. Sezerman, Paweł P. Łabaj, Tomasz Kosciolek & Kasthuri VenkateswaranAcademic press:Microbiome (rok: 2024, tom: 12, strony: 190), Wydawca: BioMed Central LtdStatus:PublishedDOI:10.1186/s40168-024-01916-8 - link to the publication