Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

Delete all

Model for antimicrobial peptide-dependent evolution of plastids

2019/35/N/NZ8/03366

Keywords:

antimicrobial peptides cell organelle endosymbiosis plastid targeting signal protein transport

Descriptors:

  • NZ8_1: Evolutionary biology
  • NZ8_11: Botany

Panel:

NZ8 - Evolutionary and environmental biology: evolution, ecology, population biology, biodiversity, biogeography

Host institution :

Uniwersytet Wrocławski, Wydział Biotechnologii

woj.

Other projects carried out by the institution 

Principal investigator (from the host institution):

Filip Pietluch 

Number of co-investigators in the project: 2

Call: PRELUDIUM 18 - announced on 2019-09-16

Amount awarded: 147 600 PLN

Project start date (Y-m-d): 2020-06-18

Project end date (Y-m-d): 2024-06-17

Project duration:: 48 months (the same as in the proposal)

Project status: Project settled

Project description

Download the project description in a pdf file

Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Information in the final report

  • Publication in academic press/journals (16)
  1. Testing Antimicrobial Properties of Human Lactoferrin-Derived Fragments
    Authors:
    Michał Ostrówka, Anna Duda-Madej. Filip Pietluch, Paweł Mackiewicz, Przemysław Gagat
    Academic press:
    International Journal of Molecular Sciences (rok: 2023, tom: 24, strony: 10529), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms241310529 - link to the publication
  2. Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data
    Authors:
    Katarzyna Sidorczuk, Przemysław Gagat, Filip Pietluch, Jakub Kała, Dominik Rafacz, Laura Bąkała, Jadwiga Słowik, Rafał Kolenda, Stefan Rödiger, Legana CHW Fingerhut, Ira R Cooke, Paweł Mackiewicz, Michał Burdukiewicz
    Academic press:
    Briefings in Bioinformatics (rok: 2022, tom: 23, strony: bbac343), Wydawca: Oxford University Press
    Status:
    Published
    DOI:
    10.1093/bib/bbac343 - link to the publication
  3. Testing Antimicrobial Properties of Selected Short Amyloids
    Authors:
    Przemysław Gagat, Anna Duda-Madej, Michał Ostrówka, Filip Pietluch, Alicja Seniuk, Paweł Mackiewicz, Michał Burdukiewicz
    Academic press:
    International Journal of Molecular Sciences (rok: 2023, tom: 24, strony: 804), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms24010804 - link to the publication
  4. Characterization of signal and transit peptides based on motif composition and taxon-specific patterns
    Authors:
    Katarzyna Sidorczuk, Paweł Mackiewicz, Filip Pietluch, Przemysław Gagat
    Academic press:
    Scientific Reports (rok: 2023, tom: 13, strony: 15751), Wydawca: Springer Nature
    Status:
    Published
    DOI:
    10.1038/s41598-023-42987-1 - link to the publication
  5. Prediction of protein subplastid localization and origin with PlastoGram
    Authors:
    Katarzyna Sidorczuk, Przemysław Gagat, Jakub Kała, Henrik Nielsen, Filip Pietluch, Paweł Mackiewicz, Michał Burdukiewicz
    Academic press:
    Prediction of protein subplastid localization and origin with PlastoGram (rok: 2023, tom: 13, strony: 8365), Wydawca: Springer Nature
    Status:
    Published
    DOI:
    10.1038/s41598-023-35296-0 - link to the publication
  6. CancerGram: An Effective Classifier for Differentiating Anticancer from Antimicrobial Peptides
    Authors:
    Burdukiewicz, Michał; Sidorczuk, Katarzyna; Rafacz, Dominik; Pietluch, Filip; Bąkała, Mateusz; Słowik, Jadwiga; Gagat, Przemysław
    Academic press:
    Pharmaceutics (rok: 2020, tom: 12(11), strony: 1045), Wydawca: Multidisciplinary Digital Publishing Institute
    Status:
    Published
    DOI:
    10.3390/pharmaceutics12 - link to the publication
  7. Testing Antimicrobial Properties of Human Lactoferrin-Derived Fragments
    Authors:
    Michał Ostrówka, Anna Duda-Madej. Filip Pietluch, Paweł Mackiewicz, Przemysław Gagat
    Academic press:
    International Journal of Molecular Sciences (rok: 2023, tom: 24, strony: 10529), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms241310529 - link to the publication
  8. CancerGram: An Effective Classifier for Differentiating Anticancer from Antimicrobial Peptides
    Authors:
    Burdukiewicz, Michał; Sidorczuk, Katarzyna; Rafacz, Dominik; Pietluch, Filip; Bąkała, Mateusz; Słowik, Jadwiga; Gagat, Przemysław
    Academic press:
    Pharmaceutics (rok: 2020, tom: 12(11), strony: 1045), Wydawca: Multidisciplinary Digital Publishing Institute
    Status:
    Published
    DOI:
    10.3390/pharmaceutics12 - link to the publication
  9. Characterization of signal and transit peptides based on motif composition and taxon-specific patterns
    Authors:
    Katarzyna Sidorczuk, Paweł Mackiewicz, Filip Pietluch, Przemysław Gagat
    Academic press:
    Scientific Reports (rok: 2023, tom: 13, strony: 15751), Wydawca: Springer Nature
    Status:
    Published
    DOI:
    10.1038/s41598-023-42987-1 - link to the publication
  10. Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data
    Authors:
    Katarzyna Sidorczuk, Przemysław Gagat, Filip Pietluch, Jakub Kała, Dominik Rafacz, Laura Bąkała, Jadwiga Słowik, Rafał Kolenda, Stefan Rödiger, Legana CHW Fingerhut, Ira R Cooke, Paweł Mackiewicz, Michał Burdukiewicz
    Academic press:
    Briefings in Bioinformatics (rok: 2022, tom: 23, strony: bbac343), Wydawca: Oxford University Press
    Status:
    Published
    DOI:
    10.1093/bib/bbac343 - link to the publication
  11. CancerGram: An Effective Classifier for Differentiating Anticancer from Antimicrobial Peptides
    Authors:
    Burdukiewicz, Michał; Sidorczuk, Katarzyna; Rafacz, Dominik; Pietluch, Filip; Bąkała, Mateusz; Słowik, Jadwiga; Gagat, Przemysław
    Academic press:
    Pharmaceutics (rok: 2020, tom: 12(11), strony: 1045), Wydawca: Multidisciplinary Digital Publishing Institute
    Status:
    Published
    DOI:
    10.3390/pharmaceutics12 - link to the publication
  12. Testing Antimicrobial Properties of Selected Short Amyloids
    Authors:
    Przemysław Gagat, Anna Duda-Madej, Michał Ostrówka, Filip Pietluch, Alicja Seniuk, Paweł Mackiewicz, Michał Burdukiewicz
    Academic press:
    International Journal of Molecular Sciences (rok: 2023, tom: 24, strony: 804), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms24010804 - link to the publication
  13. CancerGram: An Effective Classifier for Differentiating Anticancer from Antimicrobial Peptides
    Authors:
    Burdukiewicz, Michał; Sidorczuk, Katarzyna; Rafacz, Dominik; Pietluch, Filip; Bąkała, Mateusz; Słowik, Jadwiga; Gagat, Przemysław
    Academic press:
    Pharmaceutics (rok: 2020, tom: 12(11), strony: 1045), Wydawca: Multidisciplinary Digital Publishing Institute
    Status:
    Published
    DOI:
    10.3390/pharmaceutics12 - link to the publication
  14. Testing Antimicrobial Properties of Selected Short Amyloids
    Authors:
    Przemysław Gagat, Anna Duda-Madej, Michał Ostrówka, Filip Pietluch, Alicja Seniuk, Paweł Mackiewicz, Michał Burdukiewicz
    Academic press:
    International Journal of Molecular Sciences (rok: 2023, tom: 24, strony: 804), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms24010804 - link to the publication
  15. Prediction of protein subplastid localization and origin with PlastoGram
    Authors:
    Katarzyna Sidorczuk, Przemysław Gagat, Jakub Kała, Henrik Nielsen, Filip Pietluch, Paweł Mackiewicz, Michał Burdukiewicz
    Academic press:
    Prediction of protein subplastid localization and origin with PlastoGram (rok: 2023, tom: 13, strony: 8365), Wydawca: Springer Nature
    Status:
    Published
    DOI:
    10.1038/s41598-023-35296-0 - link to the publication
  16. Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data
    Authors:
    Katarzyna Sidorczuk, Przemysław Gagat, Filip Pietluch, Jakub Kała, Dominik Rafacz, Laura Bąkała, Jadwiga Słowik, Rafał Kolenda, Stefan Rödiger, Legana CHW Fingerhut, Ira R Cooke, Paweł Mackiewicz, Michał Burdukiewicz
    Academic press:
    Briefings in Bioinformatics (rok: 2022, tom: 23, strony: bbac343), Wydawca: Oxford University Press
    Status:
    Published
    DOI:
    10.1093/bib/bbac343 - link to the publication

O Narodowym Centrum Nauki

Finansowanie nauki

Współpraca zagraniczna

Centrum prasowe

Deklaracja dostępności
Przetwarzanie danych osobowych
Polityka cookies

Partnerzy