Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

Delete all

Relative dependencies analysis in the exploration of multi-omics data

2019/33/B/ST6/02386

Keywords:

data mining relative dependence analysis hierarchical structures multi-omics bioinformatics

Descriptors:

  • ST6_13: Bioinformatics, biocomputing, DNA and molecular computation
  • ST6_7: Artificial intelligence, intelligent systems, multi-agent systems
  • ST6_11: Machine learning, statistical data processing and applications using signal processing (e.g. speech, image, video)

Panel:

ST6 - Computer science and informatics: informatics and information systems, computer science, scientific computing, intelligent systems

Host institution :

Politechnika Białostocka, Wydział Informatyki

woj.

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr Marcin Czajkowski 

Number of co-investigators in the project: 2

Call: OPUS 17 - announced on 2019-03-15

Amount awarded: 197 400 PLN

Project start date (Y-m-d): 2020-02-25

Project end date (Y-m-d): 2024-02-24

Project duration:: 48 months (the same as in the proposal)

Project status: Project settled

Project description

Download the project description in a pdf file

Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Information in the final report

  • Publication in academic press/journals (6)
  • Articles in post-conference publications (12)
  • Book publications / chapters in book publications (2)
  1. A comparison of different machine-learning techniques for the selection of a panel of metabolites allowing early detection of brain tumors
    Authors:
    Adrian Godlewski, Marcin Czajkowski, Patrycja Mojsak, Tomasz Pienkowski, Wioleta Gosk, Tomasz Lyson, Zenon Mariak, Joanna Reszec, Marcin Kondraciuk, Karol Kaminski, Marek Kretowski, Marcin Moniuszko, Adam Kretowski, Michal Ciborowski.
    Academic press:
    Scientific reports (rok: 2023, tom: 13:11044, strony: 45684), Wydawca: Springer
    Status:
    Published
    DOI:
    10.1038/s41598-023-38243-1 - link to the publication
  2. Exploring Protein Relative Relations in Skeletal Muscle Proteomic Analysis for Insights into Insulin Resistance and Type 2 Diabetes
    Authors:
    Anna Czajkowska, Marcin Czajkowski, Lukasz Szczerbinski, Krzysztof Jurczuk, Daniel Reska, Wojciech Kwedlo, Marek Kretowski, Piotr Zabielski, Adam Kretowski
    Academic press:
    Scientific Reports (rok: 2024, tom: 14, strony: 17631), Wydawca: Nature Publishing Group
    Status:
    Published
    DOI:
    10.1038/s41598-024-68568-4 - link to the publication
  3. A comparison of different machine-learning techniques for the selection of a panel of metabolites allowing early detection of brain tumors
    Authors:
    Adrian Godlewski, Marcin Czajkowski, Patrycja Mojsak, Tomasz Pienkowski, Wioleta Gosk, Tomasz Lyson, Zenon Mariak, Joanna Reszec, Marcin Kondraciuk, Karol Kaminski, Marek Kretowski, Marcin Moniuszko, Adam Kretowski, Michal Ciborowski.
    Academic press:
    Scientific reports (rok: 2023, tom: 1, strony: 45684), Wydawca: Springer
    Status:
    Submitted
  4. Enhancing Multi-Omics Data Classification with Relative Expression Analysis and Decision Trees
    Authors:
    Marcin Czajkowski, Krzysztof Jurczuk, Marek Kretowski
    Academic press:
    Journal of Computational Science (rok: 2024, tom: -, strony: -), Wydawca: Elsevier
    Status:
    Submitted
  5. ITree: a user-driven tool for interactive decision-making with classification trees
    Authors:
    Hubert Sokołowski, Marcin Czajkowski, Anna Czajkowska, Krzysztof Jurczuk, Marek Kretowski
    Academic press:
    Oxford Bioinformatics (rok: 2024, tom: 40, strony: 5), Wydawca: Oxford University Press
    Status:
    Published
    DOI:
    10.1093/bioinformatics/btae273 - link to the publication
  6. Enhancing Transparent Multi-Omics Classification through Evolutionary Hierarchical Relative Relations
    Authors:
    Marcin Czajkowski, Krzysztof Jurczuk, Marek Kretowski
    Academic press:
    IEEE Journal of Biomedical and Health Informatics (rok: 2024, tom: -, strony: -), Wydawca: IEEE
    Status:
    Submitted
  1. Relative Relation in KNN Classification for Gene Expression Data. A Preliminary Study
    Authors:
    Izabela Justyna Kartowicz-Stolarska, Marcin Czajkowski
    Conference:
    - (rok: 2024, tom: 32nd International Conference on Information Systems Development (ISD 2024), strony: -), Wydawca: -
    Data:
    konferencja 26-28.08.2024
    Status:
    Submitted
  2. Hierarchical relative expression analysis in multi-omics data classification
    Authors:
    Marcin Czajkowski, Krzysztof Jurczuk, and Marek Kretowski
    Conference:
    Lecture Notes in Computer Science (LNCS) 14074 (rok: 2023, tom: International Conference on Computational Science., strony: 722-729), Wydawca: Springer
    Data:
    konferencja 3-5.06.2023
    Status:
    Published
    DOI:
    10.1007/978-3-031-36021-3_69 - link to the publication
  3. Hierarchical relative expression analysis in multi-omics data classification
    Authors:
    Marcin Czajkowski, Krzysztof Jurczuk, and Marek Kretowski
    Conference:
    Lecture Notes in Computer Science (LNCS) Springer (rok: 2023, tom: International Conference on Computational Science., strony: 45665), Wydawca: Springer
    Data:
    konferencja 3-5.06.2023
    Status:
    Submitted
  4. Accelerated Evolutionary Induction of Heterogeneous Decision Trees for Gene Expression-Based Classification
    Authors:
    Marcin Czajkowski, Krzysztof Jurczuk, Marek Kretowski
    Conference:
    Proceedings of the Genetic and Evolutionary Computation Conference (rok: 2021, tom: GECCO, strony: 946-954), Wydawca: ACM
    Data:
    konferencja 10-14.07.2021
    Status:
    Published
    DOI:
    10.1145/3449639.3459376 - link to the publication
  5. Tree Based Advanced Relative Expression Analysis
    Authors:
    Marcin Czajkowski, Krzysztof Jurczuk, Marek Kretowski
    Conference:
    LNCS 12139 (rok: 2020, tom: ICCS'20, strony: 496-510), Wydawca: Springer
    Data:
    konferencja 3-5.06.2020
    Status:
    Published
    DOI:
    10.1007/978-3-030-50420-5_37 - link to the publication
  6. Accelerated Evolutionary Induction of Heterogeneous Decision Trees for Gene Expression-Based Classification
    Authors:
    Marcin Czajkowski, Krzysztof Jurczuk, Marek Kretowski
    Conference:
    Proceedings of the Genetic and Evolutionary Computation Conference (rok: 2021, tom: GECCO, strony: 946-954), Wydawca: ACM
    Data:
    konferencja 10-14.07.2021
    Status:
    Published
    DOI:
    10.1145/3449639.3459376 - link to the publication
  7. Tree Based Advanced Relative Expression Analysis
    Authors:
    Marcin Czajkowski, Krzysztof Jurczuk, Marek Kretowski
    Conference:
    LNCS 12139 (rok: 2020, tom: ICCS'20, strony: 496-510), Wydawca: Springer
    Data:
    konferencja 3-5.06.2020
    Status:
    Published
    DOI:
    10.1007/978-3-030-50420-5_37 - link to the publication
  8. Accelerated Evolutionary Induction of Heterogeneous Decision Trees for Gene Expression-Based Classification
    Authors:
    Marcin Czajkowski, Krzysztof Jurczuk, Marek Kretowski
    Conference:
    Proceedings of the Genetic and Evolutionary Computation Conference (rok: 2021, tom: GECCO, strony: 946-954), Wydawca: ACM
    Data:
    konferencja 10-14.07.2021
    Status:
    Published
    DOI:
    10.1145/3449639.3459376 - link to the publication
  9. Generic Relative Relations in Hierarchical Gene Expression Data Classification
    Authors:
    Marcin Czajkowski, Krzysztof Jurczuk, Marek Kretowski
    Conference:
    LNCS 12270 (rok: 2020, tom: PPSN XVI, strony: 372-384), Wydawca: Springer
    Data:
    konferencja 5-9.09..2020
    Status:
    Published
    DOI:
    10.1007/978-3-030-58115-2_26 - link to the publication
  10. Generic Relative Relations in Hierarchical Gene Expression Data Classification
    Authors:
    Marcin Czajkowski, Krzysztof Jurczuk, Marek Kretowski
    Conference:
    LNCS 12270 (rok: 2020, tom: PPSN XVI, strony: 372-384), Wydawca: Springer
    Data:
    konferencja 5-9.09..2020
    Status:
    Published
    DOI:
    10.1007/978-3-030-58115-2_26 - link to the publication
  11. Tree Based Advanced Relative Expression Analysis
    Authors:
    Marcin Czajkowski, Krzysztof Jurczuk, Marek Kretowski
    Conference:
    LNCS 12139 (rok: 2020, tom: ICCS'20, strony: 496-510), Wydawca: Springer
    Data:
    konferencja 3-5.06.2020
    Status:
    Published
    DOI:
    10.1007/978-3-030-50420-5_37 - link to the publication
  12. Generic Relative Relations in Hierarchical Gene Expression Data Classification
    Authors:
    Marcin Czajkowski, Krzysztof Jurczuk, Marek Kretowski
    Conference:
    LNCS 12270 (rok: 2020, tom: PPSN XVI, strony: 372-384), Wydawca: Springer
    Data:
    konferencja 5-9.09..2020
    Status:
    Published
    DOI:
    10.1007/978-3-030-58115-2_26 - link to the publication
  1. Relative Relations in Biomedical Data Classification
    Authors:
    Marcin Czajkowski
    Book:
    Encyclopedia of Data Science and Machine Learning (rok: 2023, tom: 1, strony: 2702-2712), Wydawca: IGI Global
    Status:
    Published
    DOI:
    10.4018/978-1-7998-9220-5.ch161 - link to the publication
  2. Relative Relations in Biomedical Data Classification
    Authors:
    Marcin Czajkowski
    Book:
    Encyclopedia of Data Science and Machine Learning (rok: 2023, tom: 1, strony: 2702-2712), Wydawca: IGI Global
    Status:
    Published
    DOI:
    10.4018/978-1-7998-9220-5.ch161 - link to the publication

O Narodowym Centrum Nauki

Finansowanie nauki

Współpraca zagraniczna

Centrum prasowe

Deklaracja dostępności
Przetwarzanie danych osobowych
Polityka cookies

Partnerzy