Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Self-assembly and nanomechanical characterization of cellulose microfibril

2017/26/D/NZ1/00466

Keywords:

Self-assembly Cellulose AFM plant cell wall molecular dynamics

Descriptors:

  • ST3_17: Other related subjects
  • NZ1_3: Biophysics
  • NZ1_9: Biotechnology

Panel:

NZ1 - Molecular biology, structural biology, biotechnology: molecular biology, structural biology, biotechnology

Host institution :

Instytut Podstawowych Problemów Techniki Polskiej Akademii Nauk

woj. mazowieckie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr Adolfo Poma Bernaola 

Number of co-investigators in the project: 2

Call: SONATA 13 - announced on 2017-06-14

Amount awarded: 633 700 PLN

Project start date (Y-m-d): 2018-04-20

Project end date (Y-m-d): 2022-04-19

Project duration:: 48 months (the same as in the proposal)

Project status: Project settled

Project description

Download the project description in a pdf file

Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Equipment purchased [PL]

  1. Komputer+Monitor+Klawiatura+Mysz (10 700 PLN)

Information in the final report

  • Publication in academic press/journals (6)
  • Book publications / chapters in book publications (1)
  1. Mechanical and thermodynamic properties of Aβ42, Aβ40, and α-synuclein fibrils: a coarse-grained method to complement experimental studies
    Authors:
    Adolfo B. Poma, Horacio V. Guzman, Mai Suan Li and Panagiotis E. Theodorakis
    Academic press:
    Beilstein journal of nanotechnology (rok: 2019, tom: 10, strony: 500-513), Wydawca: Beilstein Institute for the Advancement of Chemical Sciences
    Status:
    Published
    DOI:
    10.51 - link to the publication
  2. Molecular Insight into the Self-Assembly Process of Cellulose Iβ Microfibril
    Authors:
    Tran Thi Minh Thu, Rodrigo A. Moreira, Stefan A. L. Weber and Adolfo B. Poma
    Academic press:
    International Journal of Molecular Sciences (rok: 2022, tom: 23, strony: 8505), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms23158505 - link to the publication
  3. Differentiating between inactive and active states of rhodopsin by atomic force microscopy in native membranes
    Authors:
    S. Senapati, Adolfo B. Poma, M. Cieplak, S. Filipek and Paul S.-H Park
    Academic press:
    Analytical Chemistry (rok: 2019, tom: 91, strony: 7226-7235), Wydawca: ACS Publications
    Status:
    Published
    DOI:
    10.1021/acs.analchem.9b00546 - link to the publication
  4. Generalization of the elastic network model for the study of large conformational changes in biomolecules
    Authors:
    Adolfo B. Poma, Mai Suan Li and Panagiotis E. Theodorakis
    Academic press:
    Physical Chemistry Chemical Physics (rok: 2018, tom: 20, strony: 17020), Wydawca: Royal Society of Chemistry
    Status:
    Published
    DOI:
    10.1039/C8CP03086C - link to the publication
  5. Martini 3 Model of Cellulose Microfibrils: On the Route to Capture Large Conformational Changes of Polysaccharides
    Authors:
    Rodrigo A. Moreira, Stefan A.L. Weber, Adolfo B. Poma
    Academic press:
    Molecules (rok: 2022, tom: 27, strony: 976), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/molecules27030976 - link to the publication
  6. Quantitative determination of mechanical stability in the novel coronavirus spike protein
    Authors:
    Rodrigo A Moreira, Mateusz Chwastyk, Joseph L. Baker, Horacio V. Guzman and Adolfo B. Poma
    Academic press:
    Nanoscale (rok: 2020, tom: 12, strony: 16409-16413), Wydawca: Royal Society of Chemistry
    Status:
    Published
    DOI:
    10.1039/D0NR03969A - link to the publication
  1. Assessing the Stability of Biological Fibrils by Molecular-Scale Simulations
    Authors:
    Rodrigo A. Moreira, Joseph L. Baker, Horacio V. Guzman, Adolfo B. Poma
    Book:
    Computer Simulations of Aggregation of Proteins and Peptides (rok: 2022, tom: 2340, strony: 357-378), Wydawca: Mai Suan Li, Andrzej Kloczkowski, Marek Cieplak, Maksim Kouza
    Status:
    Published

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