Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Plant defense system against pathogens and herbivores based on endoplasmic reticulum (ER) body

2016/23/B/NZ1/01847

Keywords:

Endoplasmic reticulum Glucosinolate

Descriptors:

  • NZ1_1: Molecular biology
  • NZ1_4: Structural biology
  • NZ3_1: Cell biology

Panel:

NZ1 - Molecular biology, structural biology, biotechnology: molecular biology, structural biology, biotechnology

Host institution :

Uniwersytet Jagielloński, Małopolskie Centrum Biotechnologii Uniwersytetu Jagiellońskiego

woj. małopolskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr Kenji Yamada 

Number of co-investigators in the project: 5

Call: OPUS 12 - announced on 2016-09-15

Amount awarded: 1 518 120 PLN

Project start date (Y-m-d): 2017-07-13

Project end date (Y-m-d): 2021-07-12

Project duration:: 48 months (the same as in the proposal)

Project status: Project settled

Project description

Download the project description in a pdf file

Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Equipment purchased [PL]

  1. Bezprzewodowy rejestrator temp. i wilgotności.
  2. ImageQuant LAS500 (chemiluminescent detection camera) (84 000 PLN)
  3. Wytrząsarka z inkubatorem bez opcji chłodzenia z komputerem do obsługi.
  4. AKTA (Systemy HPLC) (100 000 PLN)
  5. Epifluoroscencyjnego Mikroskop Zeiss Imager 2 (200 000 PLN)
  6. Mikroskop stereoskopowy.
  7. Mini wirówka.
  8. Vortex- V1 plus.
  9. Wirówka bez chłodzenia z rotorem.
  10. Lampa do hodowli roślin.
  11. Myjka ultradźwiękowa U-505.
  12. Termomikser z blokiem grzejnym.
  13. Wytrząsarka OHAUS (4 268 PLN)
  14. Wytrząsarka z inkubatorem z opcją chłodzenia.

Information in the final report

  • Publication in academic press/journals (7)
  • Book publications / chapters in book publications (1)
  1. Endoplasmic reticulum-derived bodies enable a single-cell chemical defense in Brassicaceae plants.
    Authors:
    Yamada K, Goto-Yamada S, Nakazaki A, Kunieda T, Kuwata K, Nagano AJ, Nishimura M, Hara-Nishimura I
    Academic press:
    Communications Biology (rok: 2020, tom: 3, strony: 21), Wydawca: Nature Publishing Group
    Status:
    Published
    DOI:
    10.1038/s42003-019-0739-1 - link to the publication
  2. NGS screening for identification of novel pexophagy-related mutation in Arabidopsis thaliana
    Authors:
    Sieńko, K., Żukowski, K., Yamada, K., and Goto-Yamada, S.
    Academic press:
    Proceedings (rok: 2021, tom: 76, strony: 6), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/IECGE-07155 - link to the publication
  3. Texture feature extraction from microscope images enables a robust estimation of ER body phenotype in Arabidopsis.
    Authors:
    Basak, A.K., Mirzaei, M., Strzałka, K., and Yamada, K.
    Academic press:
    Plant Methods (rok: 2021, tom: 17, strony: 109), Wydawca: BMC
    Status:
    Published
    DOI:
    10.1186/s13007-021-00810-w - link to the publication
  4. NAI2 and TSA1 Drive differentiation of constitutive and inducible ER body formation in Brassicaceae.
    Authors:
    Stefanik N, Bizan J, Wilkens A, Tarnawska-Glatt K, Goto-Yamada S, Strzałka K, Nishimura M, Hara-Nishimura I, Yamada K
    Academic press:
    Plant & Cell Physiology (rok: 2020, tom: 61, strony: 722-734), Wydawca: Oxford University Press
    Status:
    Published
    DOI:
    10.1093/pcp/pcz236 - link to the publication
  5. Vacuolar processing enzymes in the plant life cycle.
    Authors:
    Yamada K, Basak AK, Goto-Yamada S, Tarnawska-Glatt K, Hara-Nishimura I
    Academic press:
    New Phytologist (rok: 2020, tom: 226, strony: 21-31), Wydawca: John Wiley and Sons
    Status:
    Published
    DOI:
    10.1111/nph.16306 - link to the publication
  6. Microautophagy in plants: consideration of its molecular mechanism
    Authors:
    Sieńko, K., Poormassalehgoo, A., Yamada, K., and Goto-Yamada, S.
    Academic press:
    Cells (rok: 2020, tom: 9, strony: 887), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/cells9040887 - link to the publication
  7. The Arabidopsis transcription factor NAI1 activates the NAI2 promoter by binding to the G-box motifs
    Authors:
    Sarkar, S., Stefanik, N., Kunieda, T., Hara-Nishimura, I., and Yamada, K
    Academic press:
    Plant Signaling & Behavior (rok: 2021, tom: 16, strony: 1846928), Wydawca: Taylor and Francis Group
    Status:
    Published
    DOI:
    10.1080/15592324.2020.1846928 - link to the publication
  1. Cytosolic heat shock protein 90 in plant hormone and environmental stress response.
    Authors:
    Yamada K, Watanabe E
    Book:
    Heat Shock Proteins in Signaling Pathways (rok: 2019, tom: 17, strony: 217-230), Wydawca: Springer Nature
    Status:
    Published

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