Projects funded by the NCN


Information on the principal investigator and host institution

Information of the project and the call

Keywords

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Oxidation products of 5-methylcytosine as a new predictive markers for respons to systemic chemotherapy of breast cancer.

2015/17/B/NZ5/00640

Keywords:

5-methylcytosine active DNA demethylation breast cancer chemotherapy

Descriptors:

  • NZ5_3: Pathogenesis of human diseases
  • NZ5_7: Human disease treatment
  • NZ2_2: Genomics, transcriptomics, epigenomics

Panel:

NZ5 - Human and animal noninfectious diseases: etiology, mechanisms, diagnosis and treatment of diseases, poisonings and injuries (without neurological diseases)

Host institution :

Uniwersytet Mikołaja Kopernika, Collegium Medicum im. Ludwika Rydygiera w Bydgoszczy

woj. kujawsko-pomorskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr hab. Marek Foksiński 

Number of co-investigators in the project: 13

Call: OPUS 9 - announced on 2015-03-16

Amount awarded: 1 388 000 PLN

Project start date (Y-m-d): 2016-04-06

Project end date (Y-m-d): 2020-04-05

Project duration:: 36 months (the same as in the proposal)

Project status: Project completed

Project description

Download the project description in a pdf file

Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Information in the final report

  • Publication in academic press/journals (2)
  • Articles in post-conference publications (6)
  • Book publications / chapters in book publications (3)
  1. Vitamin C Transporters and Their Implications in Carcinogenesis
    Authors:
    Kinga Linowiecka, Marek Foksinski, Anna A Brożyna
    Academic press:
    Nutrients (rok: 2020, tom: 12, strony: 3869), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/nu12123869 - link to the publication
  2. The level of active DNA demethylation compounds in leukocytes and urine samples as potential epigenetic biomarkers in breast cancer patients.
    Authors:
    Linowiecka K, Guz J, Dziaman T, Urbanowska-Domańska O, Zarakowska E, Szpila A, Szpotan J, Skalska-Bugała A, Mijewski P, Siomek-Górecka A, Różalski R, Gackowski D, Oliński R, Foksiński M.
    Academic press:
    Scientific Reports (rok: 2024, tom: 14(1):6481, strony: 45672), Wydawca: Nature Publishing Group
    Status:
    Published
    DOI:
    10.1038/s41598-024-56326-5 - link to the publication
  1. Wpływ chemioterapii na poziom modyfikacji epigenetycznych oraz na ekspresję genów zaangażowanych w aktywną demetylację DNA u pacjentów z rakiem piersi.
    Authors:
    K. Linowiecka, J. Guz, T. Dziaman, J. Szpotan, E. Zarakowska, A. Szpila, M. Starczak, M. Modrzejewska, M. Gawroński, D. Gackowski, M. Foksiński
    Conference:
    Konferencja Młodych Naukowców: Dokonania naukowe doktorantów cz. IV, Poznań, Polska (rok: 2018, ), Wydawca: CREATIVETIME
    Data:
    konferencja 15,04
    Status:
    Published
  2. 5-hydroksymetylocytozyna jako potencjalny marker prognostyczny u pacjentów chorujących na raka piersi i ostrą białaczkę szpikową.
    Authors:
    J. Szpotan, M. Modrzejewska, K. Linowiecka, E. Zarakowska, A. Szpila, M. Starczak, M. Gawroński, A. Łabejszo, D. Gackowski, M. Foksiński.
    Conference:
    Konferencja Młodych Naukowców: Dokonania naukowe doktorantów cz. IV, Poznań, Polska (rok: 2018, ), Wydawca: CREATIVETIME
    Data:
    konferencja 15,04
    Status:
    Published
  3. A simple UPLC-UV method for normalization of cellular concentration of metabolites involved in an active DNA demethylation process
    Authors:
    Modrzejewska M, Gawroński M, Starczak M, Foksiński M, Gackowski D
    Conference:
    3rd Congress of Polish Biosciences BIO2018 "Through interdisciplinary approach into new solutions" (rok: 2018, ), Wydawca: Acta Biochim. Pol. 2018 : Vol. 65, suppl. 2, s. 98.
    Data:
    konferencja 18-21.09
    Status:
    Published
  4. Epigenetic changes throughout breast cancer treatment: comparison the expression of genes involved in active DNA demethylation.
    Authors:
    K. Linowiecka, J. Guz, T. Dziaman, E. Zarakowska, A. Szpila, D. Gackowski, J. Szpotan, M. Foksinski.
    Conference:
    The 43rd FEBS Congress Biochemistry Forever 2018 (rok: 2018, ), Wydawca: FEBS Open Bio 2018 : Vol. 8, suppl. 1, s. 335-336.
    Data:
    konferencja 7-12.07
    Status:
    Published
  5. Profile of the products of active DNA demethylation pathways in leukocytes of breast and colon cancer patients.
    Authors:
    Marta Starczak, Ewelina Zarakowska, Martyna Modrzejewska, Tomasz Dziaman, Anna Szpila, Kinga Linowiecka, Justyna Szpotan, Maciej Gawronski, Zbigniew Banaszkiewicz, Bogdan Zurawski, Olga Urbanowska-Domanska, Marek Foksinski, Ryszard Olinski, Daniel Gackowski
    Conference:
    3rd Congress of Polish Biosciences BIO2018 "Through interdisciplinary approach into new solutions'" (rok: 2018, ), Wydawca: Acta Biochim. Pol. 2018 : Vol. 65, suppl. 2, s. 89.
    Data:
    konferencja 18-21.09
    Status:
    Published
  6. Expression level of TETs and TDG genes and quantification of 5-methylcytosine derivatives in the course of breast cancer treatment.
    Authors:
    K. Linowiecka, J. Guz, T. Dziaman, E. Zarakowska, A. Szpila, D. Gackowski, J. Szpotan, M. Foksinski.
    Conference:
    VISIONS IN SCIENCE VII Science & Society Berlin (rok: 2018, ), Wydawca: Max Planck PhDnet
    Data:
    konferencja 05-07.10
    Status:
    Published
  1. MS Analysis of DNA Modifications in Urinary/Body Fluids
    Authors:
    Aleksandra Skalska, Agnieszka Siomek-Gorecka, Ryszard Olinski, Rafal Rozalski
    Book:
    DNA Modifications: Methods and Protocols, Methods in Molecular Biology (rok: 2021, tom: vol 2198, strony: 109-122), Wydawca: Humana, New York, NY
    Status:
    Published
  2. Quantification of DNA Modifications Using Two-Dimensional Ultraperformance Liquid Chromatography Tandem Mass Spectrometry (2D-UPLC-MS/MS)
    Authors:
    Marta Starczak, Maciej Gawronski, Ryszard Olinski, Daniel Gackowski
    Book:
    DNA Modifications: Methods and Protocols, Methods in Molecular Biology (rok: 2021, tom: vol 2198, strony: 91-108), Wydawca: Humana, New York, NY
    Status:
    Published
  3. Preparation of Internal Standards for 2D-UPLC-MS/MS Quantification of Noncanonical DNA Bases
    Authors:
    Marta Starczak, Aleksandra Skalska, Rafal Rozalski, Ryszard Olinski, Daniel Gackowski
    Book:
    DNA Modifications: Methods and Protocols, Methods in Molecular Biology (rok: 2021, tom: vol 2198, strony: 123-136), Wydawca: Humana, New York, NY
    Status:
    Published