Elucidating the gene regulatory network of zebrafish heart development using genomics
2014/13/B/NZ2/03863
Keywords
Descriptors
- NZ2_2: Genomika, transkryptomika i epigenomika
- NZ2_3: Proteomika
- NZ3_2: Fizjologia komórki
Panel
NZ2 – Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology
Host institution
Międzynarodowy Instytut Biologii Molekularnej i Komórkowej
Voivodeship: mazowieckie
Principal investigator (from the host institution)
Number of co-investigators in the project: 3
Call
OPUS 7 – announced on 2014-03-17
- Amount awarded
- 955 500 PLN
- Project start date
- 2015-01-23
- Project end date
- 2018-01-22
- Project duration
- 36 months (the same as in the proposal)
- Project status
- Project settled
Equipment purchased [PL]
- Bioanalyzer. Cost: 50 000 PLN
- Bioinformatyczny sprzęt komputerowy. Cost: 15 000 PLN
- Inkubator - 2 sztuki. Cost: 60 791 PLN
- Systemy do elektroforezy białek i technik typu "Western-blot". Cost: 10 000 PLN
- Transiluminator z pokrywą.
- Zestaw hodowlany Danio rerio. Cost: 98 000 PLN
Information in the final report
Publication in academic press/journals (3)
-
The canonical way to make a heart: β-catenin and plakoglobin in heart development and remodeling
- Authors:
- Piven Oksana, Winata Cecilia
- Academic press:
- Experimental Biology and Medicine (year: 2017, volume: 242(18), pages: 1735-1745), Publisher: SAGE Publications Inc.
- Status:
- Published
- DOI:
- 10.1177/1535370217732737 – link to the publication
-
Cytoplasmic polyadenylation-mediated translational control of maternal mRNAs directs maternal to zygotic transition
- Authors:
- Winata CL, Łapiński M, Pryszcz L, Vaz C, Bin Ismail MH, Nama S, Hajan HS, Lee SGP, Korzh V, Sampath P, Tanavde V, Mathavan S.
- Academic press:
- Development (year: 2018, volume: 46030, pages: 145(1)), Publisher: Company of Biologists Ltd
- Status:
- Published
- DOI:
- 10.1242/dev.159566 – link to the publication
-
Dynamics of cardiomyocyte transcriptome and chromatin landscape demarcates key events of heart development
- Authors:
- Michal Pawlak, Katarzyna Z. Kedzierska, Maciej Migdal, Karim Abu Nahia, Jordan A. Ramilowski, Lukasz Bugajski, Kosuke Hashimoto, Aleksandra Marconi, Katarzyna Piwocka, Piero Carninci, and Cecilia L. Winata
- Academic press:
- Genome Research (year: 2019, volume: 29(3), pages: 506-519), Publisher: Cold Spring Harbor Laboratory Press
- Status:
- Published
- DOI:
- 10.1101/gr.244491.118 – link to the publication
Articles in post-conference publications (3)
-
Elucidating the gene regulatory network of zebrafish heart development using genomics
- Authors:
- Niescierowicz, Katarzyna ; Lapinski, Maciej ; Abu Nahia, K ; Carvalho, Ana Leonor ; Winata, Cecilia
- Conference:
- 18th International Congress of Developmental Biology (year: 2017, pages: S140-S140), Publisher: ELSEVIER SCIENCE BV
- Date:
- conference JUN 18-22, 2017
- Status:
- Published
-
Genomics dissection of the zebrafish heart
- Authors:
- Pawlak, Michal ; Kedzierska, Katarzyna ; Bugajski, Lukasz ; Hashimoto, Kosuke ; Ramilowski, Jordan ; Marconi, Aleksandra ; Carninci, Piero ; Piwocka, Katarzyna; Winata, Cecilia
- Conference:
- 18th International Congress of Developmental Biology (year: 2017, pages: S143-S143), Publisher: ELSEVIER SCIENCE BV
- Date:
- conference JUN 18-22, 2017
- Status:
- Published
-
Identification of epigenomic regulatory network of heart development
- Authors:
- Michal Pawlak, Katarzyna Kedzierska, Maciej Migdal, Karim Abu Nahia, Hashimoto Kosuke, Jordan Ramilowski, Lukasz Bugajski, Aleksandra Marconi, Katarzyna Piwocka, Piero Carninci, Cecilia Winata
- Conference:
- Human Genome Meeting 2018 (year: 2018, pages: https://www.hugo-hgm.org/), Publisher: Human Genome Organization
- Date:
- conference 12 - 15 March
- Status:
- Published
- DOI:
- link to the publication