Projects funded by the NCN


Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Mathematical and computational models of cell cycle regulation and spatial paracrine regulation in biological cells, importance of stochastic effects

2012/05/B/ST6/03472

Keywords:

intercellular comunication and regulation spatial effects modelling and simulation

Descriptors:

  • ST7_3: Simulation engineering and modelling
  • NZ2_10: Biological systems analysis, modelling and simulation

Panel:

ST6 - Computer science and informatics: informatics and information systems, computer science, scientific computing, intelligent systems

Host institution :

Politechnika Śląska, Wydział Automatyki, Elektroniki i Informatyki

woj. śląskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr hab. Krzysztof Fujarewicz 

Number of co-investigators in the project: 8

Call: OPUS 3 - announced on 2012-03-15

Amount awarded: 777 670 PLN

Project start date (Y-m-d): 2013-03-18

Project end date (Y-m-d): 2016-09-17

Project duration:: 42 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. Komputery przenośne (2 szt.) (12 000 PLN)
  2. Komputer przenośny (6 000 PLN)

Information in the final report

  • Publication in academic press/journals (12)
  • Articles in post-conference publications (19)
  • Book publications / chapters in book publications (6)
  1. Analysis options for high-throughput sequencing in miRNA expression profiling
    Authors:
    Stokowy T, Eszlinger M, Swierniak M, Fujarewicz K, Jarzab B, Paschke R, Krohn K
    Academic press:
    BMC Research Notes (rok: 2014, tom: 7(144), strony: 45303), Wydawca: BioMed Central
    Status:
    Published
    DOI:
    10.1186/1756-0500-7-144 - link to the publication
  2. Connecting radiation-induced bystander effects and senescence to improve radiation response prediction
    Authors:
    Jan Poleszczuk, Aleksandra Krzywoń, Maria Wideł, Urszula Foryś
    Academic press:
    Radiation Research (rok: 2015, tom: 183, strony: 571-577), Wydawca: Radiation Research Society
    Status:
    Published
    DOI:
    10.1667/RR13907.1 - link to the publication
  3. On the sensitivity of feature ranked lists for large-scale biological data
    Authors:
    Danuta Gaweł, Krzysztof Fujarewicz
    Academic press:
    Mathematical Biosciences and Engineering (rok: 2013, tom: 10(3), strony: 667-690), Wydawca: American Institute of Mathematical Sciences
    Status:
    Published
  4. The different radiation response and radiation-induced bystander effects in colorectal carcinoma cells differing in p53 status
    Authors:
    Widel M, Lalik A, Krzywon A, Poleszczuk J, Fujarewicz K, Rzeszowska-Wolny J
    Academic press:
    Mutation Research-fundamental and Molecular Mechanisms of Mutagenesis (rok: 2015, tom: 778, strony: 61-70), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.mrfmmm.2015.06.003 - link to the publication
  5. Global Gene Expression Profiling in Three Tumor Cell Lines Subjected to Experimental Cycling and Chronic Hypoxia
    Authors:
    Olbryt M, Habryka A, Student S, Jarzab M, Tyszkiewicz T, Lisowska K
    Academic press:
    Plos One (rok: 2014, tom: 9(8), strony: 45302), Wydawca: PLOS
    Status:
    Published
    DOI:
    10.1371/journal.pone.0105104 - link to the publication
  6. Induction of bystander effects by UVA, UVB, and UVC radiation in human fibroblasts and the implication of reactive oxygen species
    Authors:
    Widel M, Krzywon A, Gajda K, Skonieczna M, Rzeszowska-Wolny J
    Academic press:
    Free Radical Biology and Medicine (rok: 2014, tom: 68, strony: 278-287), Wydawca: Science Direct
    Status:
    Published
    DOI:
    10.1016/j.freeradbiomed.2013.12.021 - link to the publication
  7. Modeling the repair of DNA strand breaks caused by γ-radiation in a minichromosome
    Authors:
    Łakomiec K, Kumala S, Hancock R, Rzeszowska-Wolny J, Fujarewicz K
    Academic press:
    Physical Biology (rok: 2014, tom: 11(4), strony: 45299), Wydawca: IOP Science
    Status:
    Published
    DOI:
    10.1088/1478-3975/11/4/045003 - link to the publication
  8. Radiation Induced Bystander Effect: From in Vitro Studies to Clinical Application
    Authors:
    Maria Wideł
    Academic press:
    International Journal of Medical Physics, Clinical Engineering and Radiation Oncology (rok: 2016, tom: 5, strony: 45308), Wydawca: Scientific Research Publishing Inc.
    Status:
    Published
  9. Adjoint sensitivity analysis of a tumor growth model and its application to spatiotemporal radiotherapy optimization
    Authors:
    Krzysztof Fujarewicz, Krzysztof Łakomiec
    Academic press:
    Mathematical Biosciences and Engineering (rok: 2016, tom: 13, strony: 1131-1142), Wydawca: AIMS
    Status:
    Published
    DOI:
    10.3934/mbe.2016034 - link to the publication
  10. Parameter estimation of systems with delays via structural sensitivity analysis
    Authors:
    Fujarewicz K, Łakomiec K
    Academic press:
    Discrete and Continuous Dynamical Systems-series B (rok: 2014, tom: 19(8), strony: 2521-2533), Wydawca: American Institute of Mathematical Sciences
    Status:
    Published
    DOI:
    10.3934/dcdsb.2014.19.2521 - link to the publication
  11. Estimation of initial functions for system with delays based on adjoint sensitivity analysis
    Authors:
    Krzysztof Fujarewicz
    Academic press:
    Procedia Technology (rok: 2016, tom: 22, strony: 543-548), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.protcy.2016.01.114 - link to the publication
  12. Cross-talk between UV-exposed melanoma cells and bystander normal fibroblasts modifies direct response and bystander effects
    Authors:
    Aleksandra Krzywon, Maria Wideł, Krzysztof Fujarewicz, Magdalena Skonieczna, Joanna Rzeszowska-Wolny
    Academic press:
    Free Radical Biology & Medicine (rok: 2016, tom: brak, strony: brak), Wydawca: Elsevier
    Status:
    Submitted