Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

Delete all

Analysis of protein mass profiles obtained by MALDI-ToF spectrometry to discover signatures of cancer

2011/01/N/NZ2/04813

Keywords:

MALDI-ToF pre-processing of biological data classification cancer signature

Descriptors:

  • NZ2_7: Bioinformatics
  • NZ2_3: Proteomics
  • NZ2_8: Computational biology

Panel:

NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution :

Politechnika Śląska, Wydział Automatyki, Elektroniki i Informatyki

woj. śląskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr Michał Marczyk 

Number of co-investigators in the project: 2

Call: PRELUDIUM 1 - announced on 2011-03-15

Amount awarded: 94 800 PLN

Project start date (Y-m-d): 2011-12-07

Project end date (Y-m-d): 2013-12-06

Project duration:: 24 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. Wysokowydajnościowa karta graficzna (18 000 PLN)

Information in the final report

  • Publication in academic press/journals (1)
  • Articles in post-conference publications (6)
  • Book publications / chapters in book publications (1)
  1. Initializing the EM Algorithm for Univariate Gaussian, Multi-Component, Heteroscedastic Mixture Models by Dynamic Programming Partitions
    Authors:
    A.Polański, M.Marczyk, M.Pietrowska, P.Widlak, J.Polanska
    Academic press:
    International Journal of Computational Methods (rok: 2018, tom: 15, strony: 1850012), Wydawca: World Scientific
    Status:
    Published
    DOI:
    10.1142/S0219876218500123 - link to the publication
  1. A parallel implementation of MALDI-ToF spectra modeling on Cuda-enabled graphics hardware
    Authors:
    M.Marczyk, J.Polańska, A.Polański
    Conference:
    XVIIth Gliwice Scientific Meetings (rok: 2013, ), Wydawca: Centrum Onkologii w Gliwicach
    Data:
    konferencja 15-16.11.2013 r.
    Status:
    Published
    DOI:
    link to the publication
  2. Detection and quantification of MALDI-ToF spectral peaks by using Gaussian mixture decomposition
    Authors:
    M.Marczyk, A.Polański, J.Polańska
    Conference:
    XVIth Gliwice Scientific Meetings (rok: 2012, ), Wydawca: Centrum Onkologii w Gliwicach
    Data:
    konferencja 16-17.11.2012 r.
    Status:
    Published
    DOI:
    link to the publication
  3. Improving Peak Detection by Gaussian Mixture Modeling of Mass Spectral Signal
    Authors:
    M.Marczyk, A.Polański, J.Polańska
    Conference:
    3rd International Conference on Frontiers of Signal Processing (ICFSP 2017) (rok: 2017, ), Wydawca: Institute of Electrical and Electronics Engineers (IEEE)
    Data:
    konferencja 6-8.09
    Status:
    Published
  4. Automatic post-processing of Gaussian spectral components in MALDI-ToF data analysis
    Authors:
    M.Marczyk, J. Polańska, A. Polański
    Conference:
    Bioinformatics in Toruń (rok: 2012, ), Wydawca: nie dotyczy
    Data:
    konferencja 27-29.09.2012 r.
    Status:
    Published
  5. Batch effect detection methods in microarray data
    Authors:
    A.Molencka, M.Marczyk, J.Polańska
    Conference:
    XVth Gliwice Scientific Meetings (rok: 2011, ), Wydawca: Centrum Onkologii w Gliwicach
    Data:
    konferencja 18-19.11.2011
    Status:
    Published
    DOI:
    link to the publication
  6. Peak detection by Gaussian mixture modeling of MALDI-ToF spectra for proteome profiling
    Authors:
    M.Marczyk, J.Polańska, A.Polański
    Conference:
    ISMB/ECCB 2013 (rok: 2013, ), Wydawca: nie dotyczy
    Data:
    konferencja 21-23.07.2013 r.
    Status:
    Published
    DOI:
    link to the publication
  1. Comparison of algorithms for Profile-Based Alignment of low resolutions MALDI-ToF Spectra
    Authors:
    M.Marczyk, J.Polańska, A.Polański
    Book:
    Man Machine Interactions (rok: 2014, tom: 3, strony: 193-201), Wydawca: Springer International Publishing
    Status:
    Published
    DOI:
    link to the publication

O Narodowym Centrum Nauki

Finansowanie nauki

Współpraca zagraniczna

Centrum prasowe

Deklaracja dostępności
Przetwarzanie danych osobowych
Polityka cookies

Partnerzy