Projects funded by the NCN

Identification of proteolytic cleavage sites in peptide substrates using coarse-grained docking and machine learning met...

Call: OPUS 29 , Panel: NZ1

Principal investigator: dr hab. Michał Koliński

Instytut Medycyny Doświadczalnej i Klinicznej im. Mirosława Mossakowskiego PAN

COGRIMEN 2.0 - a toolkit for coarse-grained and all-atom modeling of biomolecules in implicit environments

Call: OPUS 29 , Panel: ST4

Principal investigator: prof. Sławomir Hubert Filipek

Uniwersytet Warszawski

Multi-scale method for amyloid fibril assembly using protofilament structures predicted by coarse-grained docking simula...

Call: OPUS 22 , Panel: NZ2

Principal investigator: dr Michał Koliński

Instytut Medycyny Doświadczalnej i Klinicznej im. Mirosława Mossakowskiego PAN

Integrative methods for modeling protein-protein complexes and multimolecular assemblies

Call: SHENG 2 , Panel: NZ2

Principal investigator: dr hab. Sebastian Kmiecik

Uniwersytet Warszawski, Centrum Nauk Biologiczno-Chemicznych

Development of a new protein-protein docking method based on the flexible docking of short peptide fragments.

Call: OPUS 17 , Panel: NZ2

Principal investigator: dr Mateusz Kurciński

Uniwersytet Warszawski

Combining Rosetta method with deeply coarse grained SURPASS model into a novel multiscale algorithm for modeling protein...

Call: OPUS 15 , Panel: ST6

Principal investigator: dr hab. Dominik Gront

Uniwersytet Warszawski, Wydział Chemii

An integrated approach to modeling protein structure and dynamics based on the UNRES coarse-grained force field and bioi...

Call: HARMONIA 9 , Panel: ST4

Principal investigator: dr hab. Cezary Ryszard Czaplewski

Uniwersytet Gdański, Wydział Chemii

A coarse-grained method for RNA 3D structure modeling, with emphasis on non-canonical base pairing.

Call: OPUS 12 , Panel: ST6

Principal investigator: dr Michał Boniecki

Międzynarodowy Instytut Biologii Molekularnej i Komórkowej

COGRIMEN - coarse-grained method for modeling of large biological systems in explicit environments

Call: OPUS 8 , Panel: ST4

Principal investigator: prof. Sławomir Hubert Filipek

Uniwersytet Warszawski, Wydział Chemii

An integrated approach to the prediction of the structures of proteins and protein complexes with the use of the coarse-...

Call: HARMONIA 5 , Panel: ST4

Principal investigator: prof. Józef Adam Liwo

Uniwersytet Gdański, Wydział Chemii