Projects funded by the NCN


Information on the principal investigator and host institution

Information of the project and the call

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Predicting 3D RNA structures using Generative Adversarial Networks

2020/39/O/ST6/01488

Keywords:

bioinformatics artificial intelligence generative adversarial network 3D structure prediction RNA structure

Descriptors:

  • ST6_013:
  • ST6_012:

Panel:

ST6 - Computer science and informatics: informatics and information systems, computer science, scientific computing, intelligent systems

Host institution :

Politechnika Poznańska, Wydział Informatyki i Telekomunikacji

woj. wielkopolskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

prof. Marta Xymena Szachniuk 

Number of co-investigators in the project: 2

Call: PRELUDIUM BIS 2 - announced on 2020-09-15

Amount awarded: 540 460 PLN

Project start date (Y-m-d): 2021-10-01

Project end date (Y-m-d): 2025-09-30

Project duration:: 48 months (the same as in the proposal)

Project status: Pending project

Project description

Download the project description in a pdf file

Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Information in the final report

  • Publication in academic press/journals (5)
  1. Machine learning for RNA 2D structure prediction benchmarked on experimental data
    Authors:
    Marek Justyna, Maciej Antczak, Marta Szachniuk
    Academic press:
    Briefings in Bioinformatics (rok: 2023, tom: 24, strony: bbad153), Wydawca: Oxford University Press
    Status:
    Published
    DOI:
    10.1093/bib/bbad153 - link to the publication
  2. Machine learning for RNA 2D structure prediction benchmarked on experimental data
    Authors:
    Marek Justyna, Maciej Antczak, Marta Szachniuk
    Academic press:
    Briefings in Bioinformatics (rok: 2023, tom: 24, strony: bbad153), Wydawca: Oxford University Press
    Status:
    Published
    DOI:
    10.1093/bib/bbad153 - link to the publication
  3. Machine leraning for RNA 2D structure prediction benchmarked on experimental data
    Authors:
    Marek Justyna, Maciej Antczak, Marta Szachniuk
    Academic press:
    Briefings in Bioinformatics , Wydawca: Oxford University Press
    Status:
    Submitted
  4. How successful are machine learning models in the G4 secondary structure prediction?
    Authors:
    Julia Abel, Tomasz Zok, Marika Kaden, Mirko Weber, Lynn V Reuss, Katrin S Bohnsack, Marek Justyna, Maciej Antczak, Marta Szachniuk, Thomas Villmann
    Academic press:
    BMC Bioinformatics , Wydawca: BioMed Central
    Status:
    Submitted
  5. How successful are machine learning models in the G4 secondary structure prediction?
    Authors:
    Julia Abel, Tomasz Zok, Marika Kaden, Mirko Weber, Lynn V Reuss, Katrin S Bohnsack, Marek Justyna, Maciej Antczak, Marta Szachniuk, Thomas Villmann
    Academic press:
    BMC Bioinformatics , Wydawca: BioMed Central
    Status:
    Submitted