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Cucumber multi-omics data integration to characterize the mechanisms of sex determination influenced by climate

2020/37/B/NZ9/00586

Keywords:

next generation sequencing miRNA sex determination multi-omics data integration two-hybrid system bioinformatic modeling climate changes

Descriptors:

  • NZ9_004:

Panel:

NZ9 - Fundamentals of applied life sciences and biotechnology: agricultural, forestry, horticulture, animal production and fishery, food and nutrition sciences, industrial biosciences, environmental biotechnology and remediation

Host institution :

Szkoła Główna Gospodarstwa Wiejskiego w Warszawie, Instytut Biologii

woj. mazowieckie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr Magdalena Ewa Pawełkowicz 

Number of co-investigators in the project: 5

Call: OPUS 19 - announced on 2020-03-16

Amount awarded: 1 779 300 PLN

Project start date (Y-m-d): 2021-01-22

Project end date (Y-m-d): 2026-01-21

Project duration:: 60 months (the same as in the proposal)

Project status: Pending project

Project description

Download the project description in a pdf file

Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Information in the final report

  • Publication in academic press/journals (7)
  1. miRNA Profiling and Its Role in Multi-Omics Regulatory Networks Connected with Somaclonal Variation in Cucumber (Cucumis sativus L.)
    Authors:
    Magdalena Ewa Pawełkowicz, Agnieszka Skarzyńska, Marek Daniel Koter, Szymon Turek, Wojciech Pląder
    Academic press:
    International Journal of Molecular Sciences (rok: 2022, tom: 23, strony: 4317), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms23084317 - link to the publication
  2. From Sequencing to Genome Editing in Cucurbitaceae: Application of Modern Genomic Techniques to Enhance Plant Traits
    Authors:
    Magdalena Pawełkowicz, Bartłomiej Zieniuk, Paweł Staszek, Arkadiusz Przybysz
    Academic press:
    Agriculture (rok: 2024, tom: 14 (1), 90, strony: 14977), Wydawca: MDPI
    Status:
    Published
  3. Insight into the organization of the B10v3 cucumber genome by integration of biological and bioinformatic data
    Authors:
    Szymon Turek, Wojciech Pląder, Yoshikazu Hoshi, Agnieszka Skarzyńska, Magdalena Pawełkowicz
    Academic press:
    International Journal of Molecular Sciences (rok: 2023, tom: 24 (4), 4011, strony: 45673), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms24044011 - link to the publication
  4. Understanding Transcription Factors and How They Affect Processes in Cucumber Sex Determination
    Authors:
    Szymon Turek, Aparna Aparna, Agnieszka Skarzyńska, Wojciech Pląder, Magdalena Pawełkowicz
    Academic press:
    Metabolites (rok: 2023, tom: 13 (6), 740, strony: 45677), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/metabo13060740 - link to the publication
  5. Recent Advances in the Application of Cucurbitacins as Anticancer Agents
    Authors:
    Bartłomiej Zieniuk, Magdalena Pawełkowicz
    Academic press:
    Metabolites (rok: 2023, tom: 13 (10), 1081, strony: 45682), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/metabo13101081 - link to the publication
  6. miRNA Profiling and Its Role in Multi-Omics Regulatory Networks Connected with Somaclonal Variation in Cucumber (Cucumis sativus L.)
    Authors:
    Magdalena Ewa Pawełkowicz, Agnieszka Skarzyńska, Marek Daniel Koter, Szymon Turek, Wojciech Pląder
    Academic press:
    International Journal of Molecular Sciences (rok: 2022, tom: 23, strony: 4317), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms23084317 - link to the publication
  7. Impact of Climate Change on Regulation of Genes Involved in Sex Determination and Fruit Production in Cucumber
    Authors:
    Aparna Aparna, Agnieszka Skarzyńska, Wojciech Pląder, Magdalena Pawełkowicz
    Academic press:
    Plants (rok: 2023, tom: 12 (14), 2651, strony: 45678), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/plants12142651 - link to the publication

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