Epigenomic, immunogenetic and proteomic strategies for identification of NK cell determinants of prognostic value for patients undergoing allogeneic transplantation of hematopoietic stem cells - a multicenter study
2018/31/B/NZ2/03065
Keywords
- allogeneic transplantation of hematopoietic stem cells
- genetic variability of NK cells receptors and their ligands in donors and recipients at allele
- genotype and haplotype level of non-classical HLA
- NCR2-3 (chromosome 6)
- CD94
- NKG2A-F (chromosome 12)
- ILT2-4
- NCR1 (chromosome 19) encoding genes
- miRNA repertoire
- recipient metabolomics profile
- post-transplant complications
- GvHD
- CMV reactivation
Descriptors
- NZ2_6: Immunogenetyka
Panel
NZ2 – Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology
Host institution
Instytut Immunologii i Terapii Doświadczalnej im. Ludwika Hirszfelda Polskiej Akademii Nauk
Voivodeship: dolnośląskie
Principal investigator (from the host institution)
prof. Katarzyna Maria Bogunia-Kubik
Number of co-investigators in the project: 17
Call
OPUS 16 – announced on 2018-09-14
- Amount awarded
- 1 781 500 PLN
- Project start date
- 2019-10-03
- Project end date
- 2024-10-02
- Project duration
- 60 months (the same as in the proposal)
- Project status
- Project settled
Project description
Download the project description in a pdf file
Note — project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.
Information in the final report
Publication in academic press/journals (15)
-
Unravelling the potential of TIM-3 gene polymorphism in allogeneic hematopoietic stem cell transplantation - a preliminary study.
- Authors:
- Biały S, Siemaszko J, Sobczyk-Kruszelnicka M, Fidyk W, Solarska I, Nasiłowska-Adamska B, Skowrońska P, Bieniaszewska M, Tomaszewska A, Basak GW, Giebel S, Wróbel T, Bogunia-Kubik K.
- Academic press:
- Transplant Immunology (year: 2024, volume: 85, pages: 102084), Publisher: Elsevier
- Status:
- Published
- DOI:
- 10.1016/j.trim.2024.102084. – link to the publication
-
Soluble MICA concentrations and genetic variability of MICA and its NKG2D receptor as factors affecting Graft-versus-Host Disease development after allogeneic haematopoietic stem cell transplantation.
- Authors:
- Siemaszko J, Łacina P, Szymczak D, Szeremet A, Majcherek M, Czyż A, Sobczyk-Kruszelnicka M, Fidyk W, Solarska I, Nasiłowska-Adamska B, Skowrońska P, Bieniaszewska M, Tomaszewska A, Basak GW, Giebel S, Wróbel T, Bogunia-Kubik K.
- Academic press:
- Human Immunology (year: 2024, volume: 85, pages: 111147), Publisher: Elsevier
- Status:
- Published
- DOI:
- 10.1016/j.humimm.2024.111147. – link to the publication
-
Donor genetic determinant of thymopoiesis, rs2204985, and stem cell transplantation outcome in a multipopulation cohort.
- Authors:
- Nihtilä J, Salmenniemi U, Itälä-Remes M, Crossland R, Gallardo D, Bogunia-Kubik K, Lacina P, Bieniaszewska M, Giebel S, Hyvärinen K, Kekäläinen E, Ritari J, Partanen J.
- Academic press:
- Human Immunology (year: 2023, volume: 85, pages: 110791), Publisher: Elsevier
- Status:
- Published
- DOI:
- 10.1016/j.humimm.2024.110791. – link to the publication
-
Activating NKG2C receptor - functional characteristics and current strategies in clinical applications.
- Authors:
- Siemaszko J, Marzec-Przyszlak A, Bogunia-Kubik K.
- Academic press:
- Arch Immunol Ther Exp (Warsz). (year: 2023, volume: 71, pages: 9), Publisher: Springer
- Status:
- Published
- DOI:
- 10.1007/s00005-023-00674-z – link to the publication
-
Differential expression of miRNAs from extracellular vesicles in chronic graft-versus-host disease: A preliminary study.
- Authors:
- Łacina P, Crossland RE, Wielińska J, Czyż A, Szeremet A, Ussowicz M, Wróbel T, Dickinson AM, Bogunia-Kubik K.
- Academic press:
- Advances in Clinical and Experimental Medicine (year: 2023, volume: 32, pages: 539-544), Publisher: Wroclaw Medical University Press
- Status:
- Published
- DOI:
- 10.17219/acem/155373 – link to the publication
-
MICB Genetic Variants and Its Protein Soluble Level Are Associated with the Risk of Chronic GvHD and CMV Infection after Allogeneic HSCT.
- Authors:
- Siemaszko J, Dratwa M, Szeremet A, Majcherek M, Czyż A, Sobczyk-Kruszelnicka M, Fidyk W, Solarska I, Nasiłowska-Adamska B, Skowrońska P, Bieniaszewska M, Tomaszewska A, Basak GW, Giebel S, Wróbel T, Bogunia-Kubik K.
- Academic press:
- Arch Immunol Ther Exp (Warsz). (year: 2024, volume: 72, pages: 46031), Publisher: Sciendo
- Status:
- Published
- DOI:
- 10.2478/aite-2024-0012. – link to the publication
-
Significance of HLA-E and its two NKG2 receptors in development of complications after allogeneic transplantation of hematopoietic stem cells.
- Authors:
- Siemaszko J, Łacina P, Szymczak D, Szeremet A, Majcherek M, Czyż A, Sobczyk-Kruszelnicka M, Fidyk W, Solarska I, Nasiłowska-Adamska B, Skowrońska P, Bieniaszewska M, Tomaszewska A, Basak GW, Giebel S, Wróbel T, Bogunia-Kubik K.
- Academic press:
- Frontiers in Immunology (year: 2023, volume: 14, pages: 1227897), Publisher: Frontiers Media SA
- Status:
- Published
- DOI:
- 10.3389/fimmu.2023.1227897 – link to the publication
-
Complex interactions of cellular players in chronic Graft-versus-Host Disease.
- Authors:
- Gail LM, Schell KJ, Łacina P, Strobl J, Bolton SJ, Ulriksen ES, Bogunia-Kubik K, Greinix H, Crossland RE, Inngjerdingen M, Stary G.
- Academic press:
- Frontiers in Immunology (year: 2023, volume: 14, pages: 1199422), Publisher: Frontiers Media SA
- Status:
- Published
- DOI:
- 10.3389/fimmu.2023.1199422 – link to the publication
-
The impact of NKG2A and NKG2D receptors and HLA-E and MICA ligands polymorphisms on posttransplant complications after paediatric allogeneic HSCT: a single-centre experience.
- Authors:
- Siemaszko J, Ussowicz M, Rybka B, Ryczan-Krawczyk R, Kalwak K, Bogunia-Kubik K.
- Academic press:
- Frontiers in Genetics (year: 2023, volume: 14, pages: 1186123), Publisher: Frontiers Media SA
- Status:
- Published
- DOI:
- 10.3389/fgene.2023.1186123 – link to the publication
-
Effect of NK cell receptor genetic variation on allogeneic stem cell transplantation outcome and in vitro NK cell cytotoxicity.
- Authors:
- Nihtilä J, Penna L, Salmenniemi U, Itälä-Remes M, Crossland RE, Gallardo D, Bogunia-Kubik K, Lacina P, Bieniaszewska M, Giebel S, Karjalainen K, Jahan F, Kerkelä E, Hyvärinen K, Koskela S, Ritari J, Partanen J.
- Academic press:
- Scientific Reports (year: 2024, volume: 14, pages: 26988), Publisher: Springer Nature
- Status:
- Published
- DOI:
- 10.1038/s41598-024-78619-5. – link to the publication
-
Non-KIR NK cell receptors: Role in transplantation of allogeneic haematopoietic stem cells.
- Authors:
- Bogunia-Kubik K, Łacina P.
- Academic press:
- International Journal of Immunogenetics (year: 2021, volume: 48, pages: 157-171), Publisher: Wiley
- Status:
- Published
- DOI:
- 10.1111/iji.12523 – link to the publication
-
Potential Novel Biomarkers in Chronic Graft-Versus-Host Disease.
- Authors:
- Crossland RE, Perutelli F, Bogunia-Kubik K, Mooney N, Milutin Gašperov N, Pučić-Baković M, Greinix H, Weber D, Holler E, Pulanić D, Wolff D, Dickinson AM, Inngjerdingen M, Grce M.
- Academic press:
- Frontiers in Immunology (year: 2020, volume: 11, pages: 602547), Publisher: Frontiers Media SA
- Status:
- Published
- DOI:
- 10.3389/fimmu.2020.602547 – link to the publication
-
Review of Genetic Variation as a Predictive Biomarker for Chronic Graft-Versus-Host-Disease After Allogeneic Stem Cell Transplantation.
- Authors:
- Partanen J, Hyvärinen K, Bickeböller H, Bogunia-Kubik K, Crossland RE, Ivanova M, Perutelli F, Dressel R.
- Academic press:
- Frontiers in Immunology (year: 2020, volume: 11, pages: 575492), Publisher: Frontiers Media SA
- Status:
- Published
- DOI:
- 10.3389/fimmu.2020.575492 – link to the publication
-
Telomere length and telomerase reverse transcriptase gene polymorphism as potential markers of complete chimerism and GvHD development after allogeneic haematopoietic stem cell transplantation.
- Authors:
- Dratwa-Kuzmin M, Lacina P, Wysoczanska B, Kilinska D, Siemaszko J, Sobczyk-Kruszelnicka M, Fidyk W, Solarska I, Nasiłowska-Adamska B, Skowrońska P, Bieniaszewska M, Tomaszewska A, Basak GW, Giebel S, Bogunia-Kubik K.
- Academic press:
- Journal of Cancer Research and Clinical Oncology (year: 2025, volume: 151, pages: 109), Publisher: Springer
- Status:
- Published
- DOI:
- 10.1007/s00432-025-06160-7 – link to the publication
-
NKG2D Natural Killer Cell Receptor - A Short Description and Potential Clinical Application
- Authors:
- Jagoda Siemaszko, Aleksandra Marzec-Przyszlak, Katarzyna Bogunia-Kubik
- Academic press:
- Cells (year: 2021, volume: 10, pages: 1420), Publisher: MDPI
- Status:
- Published
- DOI:
- 10.3390/cells10061420 – link to the publication