Projects funded by the NCN
Shedding new light on genome's dark matter: identification of novel long non-coding RNAs in zebrafish
2018/31/B/NZ2/01940
Keywords:
lncRNAs długie niekodujące RNA sekwencjonowanie trzeciej generacji celowane sekwencjonowanie RNA Oxford Nanopore Danio rerio adnotacja genomów
Descriptors:
- NZ2_2:
- NZ2_7:
- NZ2_8:
Panel:
NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology
Host institution :
Instytut Chemii Bioorganicznej Polskiej Akademii Nauk
woj. wielkopolskie
Principal investigator (from the host institution):
dr hab. Barbara Uszczyńska-Ratajczak
Number of co-investigators in the project: 5
Call: OPUS 16 - announced on 2018-09-14
Amount awarded: 1 896 000 PLN
Project start date (Y-m-d): 2019-09-03
Project end date (Y-m-d): 2023-09-02
Project duration:: 48 months (the same as in the proposal)
Project status: Project settled
Project description
Download the project description in a pdf file
Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.
Information in the final report
- Publication in academic press/journals (3)
- The abundance of the long intergenic non-coding RNA 01087 differentiates between luminal and triple-negative breast cancers and predicts patient outcomeAuthors:De Palma FDE, Del Monaco V, Pol JG, Kremer M, D'Argenio V, Stoll G, Montanaro D, Uszczyńska-Ratajczak B, Klein CC, Vlasova A, Botti G, D'Aiuto M, Baldi A, Guigó R, Kroemer G, Maiuri MC, Salvatore FAcademic press:Pharmacological Research (rok: 2020, tom: 161, strony: bd), Wydawca: ElsevierStatus:PublishedDOI:10.1016/j.phrs.2020.105249 - link to the publication
- CapTrap-Seq: A platform-agnostic and quantitative approach for high-fidelity full-length RNA transcript sequencingAuthors:Carbonell-Sala S, Perteghella T, Lagarde J, Nishiyori H, Palumbo E, Arnan C, Takahashi H, Carninci P, Uszczyńska-Ratajczak B, Guigó RAcademic press:Nature Communications (rok: 2024, tom: 15, strony: 5278), Wydawca: Nature PortfolioStatus:PublishedDOI:10.1038/s41467-024-49523-3 - link to the publication
- The abundance of the long intergenic non-coding RNA 01087 differentiates between luminal and triple-negative breast cancers and predicts patient outcomeAuthors:De Palma FDE, Del Monaco V, Pol JG, Kremer M, D'Argenio V, Stoll G, Montanaro D, Uszczyńska-Ratajczak B, Klein CC, Vlasova A, Botti G, D'Aiuto M, Baldi A, Guigó R, Kroemer G, Maiuri MC, Salvatore FAcademic press:Pharmacological Research (rok: 2020, tom: 161, strony: bd), Wydawca: ElsevierStatus:PublishedDOI:10.1016/j.phrs.2020.105249 - link to the publication