Shedding new light on genome's dark matter: identification of novel long non-coding RNAs in zebrafish

2018/31/B/NZ2/01940

Keywords

Descriptors

  • NZ2_2: Genomika, transkryptomika i epigenomika
  • NZ2_7: Bioinformatyka
  • NZ2_8: Biologia obliczeniowa

Panel

NZ2 – Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution

Instytut Chemii Bioorganicznej PAN

Voivodeship: wielkopolskie

Other projects carried out by the institution »

Principal investigator (from the host institution)

dr hab. Barbara Uszczyńska-Ratajczak

Number of co-investigators in the project: 5

Call

OPUS 16 – announced on 2018-09-14

Amount awarded
1 896 000 PLN
Project start date
2019-09-03
Project end date
2023-09-02
Project duration
48 months (the same as in the proposal)
Project status
Project settled

Project description

Download the project description in a pdf file

Note — project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Information in the final report

Publication in academic press/journals (2)

  1. The abundance of the long intergenic non-coding RNA 01087 differentiates between luminal and triple-negative breast cancers and predicts patient outcome

    Authors:
    De Palma FDE, Del Monaco V, Pol JG, Kremer M, D'Argenio V, Stoll G, Montanaro D, Uszczyńska-Ratajczak B, Klein CC, Vlasova A, Botti G, D'Aiuto M, Baldi A, Guigó R, Kroemer G, Maiuri MC, Salvatore F
    Academic press:
    Pharmacological Research (year: 2020, volume: 161, pages: bd), Publisher: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.phrs.2020.105249 – link to the publication
  2. CapTrap-Seq: A platform-agnostic and quantitative approach for high-fidelity full-length RNA transcript sequencing

    Authors:
    Carbonell-Sala S, Perteghella T, Lagarde J, Nishiyori H, Palumbo E, Arnan C, Takahashi H, Carninci P, Uszczyńska-Ratajczak B, Guigó R
    Academic press:
    Nature Communications (year: 2024, volume: 15, pages: 5278), Publisher: Nature Portfolio
    Status:
    Published
    DOI:
    10.1038/s41467-024-49523-3 – link to the publication

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