Projects funded by the NCN
Contribution of gene copy number polymorphism to natural variation in response of Arabidopsis thaliana ecotypes to biotic stress
2017/26/D/NZ2/01079
Keywords:
DNA copy number variation nanopore sequencing,biotics stress R resistance genes NBS-LRR genes gene expression gene dosage
Descriptors:
- NZ2_2:
- NZ8_9:
- NZ2_7:
Panel:
NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology
Host institution :
Instytut Chemii Bioorganicznej Polskiej Akademii Nauk
woj. wielkopolskie
Principal investigator (from the host institution):
dr hab. Agnieszka Jowita Żmieńko
Number of co-investigators in the project: 6
Call: SONATA 13 - announced on 2017-06-14
Amount awarded: 812 120 PLN
Project start date (Y-m-d): 2018-09-17
Project end date (Y-m-d): 2022-09-16
Project duration:: 48 months (the same as in the proposal)
Project status: Project settled
Project description
Download the project description in a pdf file
Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.
Information in the final report
- Publication in academic press/journals (3)
- Sekwencjonowanie nanoporowe i jego zastosowanie w biologiiAuthors:Anastasiia Satyr, Agnieszka ŻmieńkoAcademic press:Postępy biochemii (rok: 2020, tom: 66, strony: 193-204), Wydawca: Polskie Towarzystwo BiochemiczneStatus:PublishedDOI:10.18388/pb.2020_328 - link to the publication
- AthCNV - a map of DNA copy number variations in the Arabidopsis thaliana genomeAuthors:Agnieszka Żmieńko, Małgorzata Marszałek-Zeńczak, Paweł Wojciechowski, Anna Samelak-Czajka, Magdalena Łuczak, Piotr Kozłowski, Wojciech M. Karłowski, Marek FiglerowiczAcademic press:Plant Cell (rok: 2020, tom: 32, strony: 1797–1819), Wydawca: American Society of Plant Biologists (ASPB)Status:PublishedDOI:10.1105/tpc.19.00640 - link to the publication
- Analysis of Arabidopsis nonreference accessions reveals high diversity of metabolic gene clusters and discovers new candidate cluster membersAuthors:Malgorzata Marszalek-Zenczak, Anastasiia Satyr, Pawel Wojciechowski, Michal Zenczak, Paula Sobieszczanska, Krzysztof Brzezinski, Tetiana Iefimenko, Marek Figlerowicz, Agnieszka ZmienkoAcademic press:Frontiers in Plant Science (rok: 2023, tom: 14, strony: 1104303), Wydawca: Frontiers MediaStatus:PublishedDOI:10.3389/fpls.2023.1104303 - link to the publication