Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Analysis of selected processes influencing the architecture of fungal genomes and proteomes

2017/25/B/NZ2/01880

Keywords:

fungal lifestyle genome achitecture comparative genomics HGT transposons

Descriptors:

  • NZ2_2: Genomics, transcriptomics, epigenomics
  • NZ6_7: Mycology

Panel:

NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution :

Instytut Biochemii i Biofizyki Polskiej Akademii Nauk

woj. mazowieckie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr hab. Anna Muszewska 

Number of co-investigators in the project: 5

Call: OPUS 13 - announced on 2017-03-15

Amount awarded: 403 840 PLN

Project start date (Y-m-d): 2018-01-19

Project end date (Y-m-d): 2022-01-18

Project duration:: 48 months (the same as in the proposal)

Project status: Project settled

Project description

Download the project description in a pdf file

Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Equipment purchased [PL]

  1. laptop (2 szt.) (10 000 PLN)
  2. serwer bioinformatyczny (36 000 PLN)

Information in the final report

  • Publication in academic press/journals (9)
  1. Poly-Saturated Dolichols from Filamentous Fungi Modulate Activity of Dolichol-Dependent Glycosyltransferase and Physical Properties of Membranes
    Authors:
    Gryz E, Perlińska-Lenart U, Gawarecka K, Jozwiak A, Piłsyk S, Lipko A, Jemiola-Rzeminska M, Bernat P, Muszewska A, Steczkiewicz K, Ginalski K, Długoński J, Strzalka K, Swiezewska E, Kruszewska JS
    Academic press:
    International journal of molecular sciences (rok: 2019, tom: 20, strony: 3043), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms20123043 - link to the publication
  2. Analysis of transposable elements in Coccidioides species
    Authors:
    T Kirkland, A Muszewska, J Stajich
    Academic press:
    Journal of Fungi (rok: 2018, tom: 4(1), strony: 13), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/jof4010013 - link to the publication
  3. Locus-aware decomposition of gene trees with respect to polytomous species trees
    Authors:
    Ciach MA, Muszewska A, Górecki P
    Academic press:
    Algorithms for Molecular Biology (rok: 2018, tom: 0,549305555555556, strony: 18), Wydawca: Springer Nature
    Status:
    Published
    DOI:
    10.1186/s13015-018-0128-1 - link to the publication
  4. Metabolic Potential, Ecology and Presence of Associated Bacteria Is Reflected in Genomic Diversity of Mucoromycotina
    Authors:
    Muszewska Anna, Okrasińska Alicja, Steczkiewicz Kamil, Drgas Olga, Orłowska Małgorzata, Perlińska-Lenart Urszula, Aleksandrzak-Piekarczyk Tamara, Szatraj Katarzyna, Zielenkiewicz Urszula, Piłsyk Sebastian, Malc Ewa, Mieczkowski Piotr, Kruszewska Joanna S., Bernat Przemysław, Pawłowska Julia
    Academic press:
    Frontiers in Microbiology (rok: 2021, tom: 12, strony: 239), Wydawca: Frontiers
    Status:
    Published
    DOI:
    10.3389/fmicb.2021.636986 - link to the publication
  5. Terpenoid Biosynthesis Dominates among Secondary Metabolite Clusters in Mucoromycotina Genomes
    Authors:
    Grzegorz Koczyk, Julia Pawłowska, Anna Muszewska
    Academic press:
    Journal of Fungi (rok: 2021, tom: 7, strony: -), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/jof7040285 - link to the publication
  6. Transposable elements contribute to fungal genes and impact fungal lifestyle
    Authors:
    MUSZEWSKA A., STECZKIEWICZ K., STĘPNIEWSKA-DZIUBIŃSKA M.M., GINALSKI K.
    Academic press:
    Scientific Reports (rok: 2019, tom: 3,36597222222222, strony: -), Wydawca: Springer Nature
    Status:
    Published
    DOI:
    10.1038/s41598-019-40965-0 - link to the publication
  7. Utilization of cobalamin is ubiquitous in early-branching fungal phyla
    Authors:
    Małgorzata Orłowska, Kamil Steczkiewicz and Anna Muszewska
    Academic press:
    Genome Biology and Evolution (rok: 2021, tom: brak, strony: brak), Wydawca: Oxford Journals
    Status:
    Published
    DOI:
    10.1093/gbe/evab043 - link to the publication
  8. Horizontal gene transfer in 44 early diverging fungi favors short, metabolic, extracellular proteins from associated bacteria
    Authors:
    Michał Ciach, Julia Pawłowska, Anna Muszewska
    Academic press:
    Microbiology Spectrum (rok: 2022, tom: -, strony: -), Wydawca: ASM
    Status:
    Submitted
    DOI:
    - - link to the publication
  9. In Silico Predictions of Ecological Plasticity Mediated by Protein Family Expansions in Early-Diverging Fungi
    Authors:
    Małgorzata Orłowska, Anna Muszewska
    Academic press:
    Journal of Fungi (rok: 2022, tom: 8, strony: -), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/jof8010067 - link to the publication

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