Projects funded by the NCN


Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Molecular modeling of allosteric binding and allosteric-orthosteric coupling in cannabinoid receptor CB1

2016/23/N/NZ1/02960

Keywords:

Molecular dynamics GPCR CB1 cannabinoid receptor Allosteric modulation REMD Simulated annealing

Descriptors:

  • NZ2_10: Biological systems analysis, modelling and simulation
  • NZ1_1: Molecular biology
  • NZ3_7: Signal transduction

Panel:

NZ1 - Molecular biology, structural biology, biotechnology: molecular biology, structural biology, biotechnology

Host institution :

Uniwersytet Warszawski, Wydział Chemii

woj. mazowieckie

Other projects carried out by the institution 

Principal investigator (from the host institution):

Jakub Jakowiecki 

Number of co-investigators in the project: 2

Call: PRELUDIUM 12 - announced on 2016-09-15

Amount awarded: 99 200 PLN

Project start date (Y-m-d): 2017-07-12

Project end date (Y-m-d): 2020-10-11

Project duration:: 39 months (the same as in the proposal)

Project status: Project settled

Project description

Download the project description in a pdf file

Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Equipment purchased [PL]

  1. Stacja robocza GPU (1 392 PLN)

Information in the final report

  • Publication in academic press/journals (2)
  1. The hydrophobic ligands entry and exit from the GPCR binding site - SMD and SuMD simulations
    Authors:
    Jakub Jakowiecki, Urszula Orzeł, Sathapana Chawananon, Przemysław Miszta, Sławomir Filipek
    Academic press:
    Molecules (rok: 2020, tom: 25(8), strony: 1930), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/molecules25081930 - link to the publication
  2. Allosteric modulation of CB1 cannabinoid receptor by cannabidiol – molecular modeling of the N terminal domain and the allosteric-orthosteric coupling
    Authors:
    Jakub Jakowiecki, Renata Abel, Urszula Orzeł, Paweł Pasznik, Robert Preissner, Sławomir Filipek
    Academic press:
    Molecules (rok: 2021, tom: 26, strony: 2456), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/molecules26092456 - link to the publication