Projects funded by the NCN


Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

Delete all

Development of bioinformatics models to analyze 3D RNA structures in torsion angle space

2016/23/N/ST6/03779

Keywords:

RNA 3D torsion angles bioinformatics computational biology

Descriptors:

  • ST6_13: Bioinformatics, biocomputing, DNA and molecular computation

Panel:

ST6 - Computer science and informatics: informatics and information systems, computer science, scientific computing, intelligent systems

Host institution :

Politechnika Poznańska, Wydział Informatyki

woj. wielkopolskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

Tomasz Żok 

Number of co-investigators in the project: 2

Call: PRELUDIUM 12 - announced on 2016-09-15

Amount awarded: 44 400 PLN

Project start date (Y-m-d): 2017-08-16

Project end date (Y-m-d): 2019-02-15

Project duration:: 18 months (the same as in the proposal)

Project status: Project settled

Project description

Download the project description in a pdf file

Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Information in the final report

  • Publication in academic press/journals (2)
  1. RNAfitme: a webserver for modeling nucleobase and nucleoside residue conformation in fixed-backbone RNA structures
    Authors:
    Maciej Antczak , Tomasz Zok , Maciej Osowiecki , Mariusz Popenda , Ryszard W. Adamiak , Marta Szachniuk
    Academic press:
    BMC Bioinformatics (rok: 2018, tom: 19, strony: 304), Wydawca: BioMed Central
    Status:
    Published
    DOI:
    10.1186/s12859-018-2317-9 - link to the publication
  2. RNApdbee 2.0: multifunctional tool for RNA structure annotation
    Authors:
    Tomasz Zok , Maciej Antczak , Michal Zurkowski , Mariusz Popenda , Jacek Blazewicz , Ryszard W. Adamiak , Marta Szachniuk
    Academic press:
    Nucleic Acids Research (rok: 2018, tom: 46, strony: W30-W35), Wydawca: Oxford University Press
    Status:
    Published
    DOI:
    10.1093/nar/gky314 - link to the publication