Bayesian analysis of bladder cancer subtypes based on high-throughput data

2016/21/N/ST6/01507

Keywords

Descriptors

  • ST6_13: Bioinformatyka, bioobliczenia, obliczenia DNA i molekularne
  • ST6_11: Uczenie maszynowe, statystyczne przetwarzanie danych i zastosowanie w przetwarzaniu sygnałów
  • NZ2_10: Modelowanie i symulacje biologiczne

Panel

ST6 – Computer science and informatics: informatics and information systems, computer science, scientific computing, intelligent systems

Host institution

Uniwersytet Warszawski, Wydział Matematyki, Informatyki i Mechaniki

Voivodeship: mazowieckie

Other projects carried out by the institution »

Principal investigator (from the host institution)

Krzysztof Kamil Gogolewski

Number of co-investigators in the project: 3

Call

PRELUDIUM 11 – announced on 2016-03-15

Amount awarded
75 400 PLN
Project start date
2017-02-17
Project end date
2019-11-16
Project duration
33 months (the same as in the proposal)
Project status
Project settled

Project description

Download the project description in a pdf file

Note — project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Equipment purchased [PL]

  1. Komputer przenośny + akcesoria. Cost: 7 000 PLN

Information in the final report

Publication in academic press/journals (2)

  1. Truncated robust principal component analysis and noise reduction for single cell RNA-seq data

    Authors:
    Krzysztof Gogolewski, Maciej Sykulski, Neo Christopher Chung and Anna Gambin
    Academic press:
    Journal of Computational Biology (year: 2019, volume: 1,08888888888889, pages: 782-793), Publisher: Mary Ann Liebert
    Status:
    Published
    DOI:
    10.1089/cmb.2018.0255 – link to the publication
  2. Inferring Molecular Processes Heterogeneity from Transcriptional Data

    Authors:
    Krzysztof Gogolewski, Weronika Wronowska, Agnieszka Lech, Bogdan Lesyng, and Anna Gambin
    Academic press:
    BioMed Research International (year: 2017, volume: 2017, pages: 14), Publisher: Hindawi
    Status:
    Published
    DOI:
    10.1155/2017/6961786 – link to the publication

Articles in post-conference publications (2)

  1. Renal cell carcinoma classification: a case study of pitfalls associated with metabolic landscape analysis

    Authors:
    Krzysztof Gogolewski, Marcin Kostecki, Anna Gambin
    Conference:
    2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) (year: 2018, pages: 96-101), Publisher: IEEE
    Date:
    conference 03.12-06.12
    Status:
    Published
  2. Truncated Robust Principal Component Analysis and Noise Reduction for Single Cell RNA-seq Data

    Authors:
    Krzysztof Gogolewski, Maciej Sykulski, Neo Christopher Chung and Anna Gambin
    Conference:
    International Symposium on Bioinformatics Research and Applications (year: 2018, pages: 335-346), Publisher: Springer, Cham
    Date:
    conference 8,06
    Status:
    Published

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