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Comparing genetic and epigenetic variation in a model grass Brachypodium distachyon in driving adaptation to distinct natural environments

2015/18/M/NZ2/00394

Keywords:

abiotic stress adaptation Brachypodium distachyon epigenetic and genetic variation diverse environments drought grasses model organism natural populations salinity

Descriptors:

  • NZ2_2: Genomics, transcriptomics, epigenomics
  • NZ2_5: Cell genetics
  • NZ8_4: Biodiversity

Panel:

NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution :

Uniwersytet Śląski w Katowicach, Wydział Nauk Przyrodniczych

woj. śląskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

prof. Robert Hasterok 

Number of co-investigators in the project: 12

Call: HARMONIA 7 - announced on 2015-06-15

Amount awarded: 1 481 730 PLN

Project start date (Y-m-d): 2016-04-27

Project end date (Y-m-d): 2021-03-26

Project duration:: 59 months (the same as in the proposal)

Project status: Project settled

Project description

Download the project description in a pdf file

Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Information in the final report

  • Publication in academic press/journals (8)
  1. Allotetraploidization in Brachypodium may have led to the dominance of one parent's metabolome in germinating seeds
    Authors:
    Aleksandra Skalska, Elzbieta Wolny, Manfred Beckmann, John H. Doonan, Robert Hasterok, Luis A. J. Mur
    Academic press:
    Cells (rok: 2021, tom: 10, strony: 828 (1-16)), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/cells10040828 - link to the publication
  2. Defining the cell wall, cell cycle and chromatin landmarks in the responses of Brachypodium distachyon to salinity
    Authors:
    Elzbieta Wolny, Aleksandra Skalska, Agnieszka Braszewska, Luis A. J. Mur, Robert Hasterok
    Academic press:
    International Journal of Molecular Sciences (rok: 2021, tom: 22, strony: 949 (1-23)), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms22020949 - link to the publication
  3. Genetic and methylome variation in Turkish Brachypodium distachyon accessions differentiate two geographically distinct subpopulations
    Authors:
    Aleksandra Skalska, Christoph Stritt, Michele Wyler, Hefin W. Williams, Martin Vickers, Jiwan Han, Metin Tuna, Gulsemin Savas Tuna, Karolina Susek, Martin Swain, Rafał K. Wóycicki, Saurabh Chaudhary, Fiona Corke, John H. Doonan, Anne C. Roulin, Robert Hasterok, Luis A. J. Mur
    Academic press:
    International Journal of Molecular Sciences (rok: 2020, tom: 21, strony: 6700 (1-17)), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms21186700 - link to the publication
  4. Metabolomic variation aligns with two geographically distinct subpopulations of Brachypodium distachyon before and after drought stress
    Authors:
    Aleksandra Skalska, Manfred Beckmann, Fiona Corke, Gulsemin Savas Tuna, Metin Tuna, John H. Doonan, Robert Hasterok, Luis A. J. Mur
    Academic press:
    Cells (rok: 2021, tom: 10, strony: 683 (1-15)), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/cells10030683 - link to the publication
  5. Germination and the early stages of seedling development in Brachypodium distachyon
    Authors:
    Elzbieta Wolny, Alexander Betekhtin, Magdalena Rojek, Agnieszka Braszewska-Zalewska, Joanna Lusinska, Robert Hasterok
    Academic press:
    International Journal of Molecular Sciences (rok: 2018, tom: 19, strony: 2916 (1-14)), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms19102916 - link to the publication
  6. Migration without interbreeding: evolutionary history of a highly selfing Mediterranean grass inferred from whole genomes
    Authors:
    Christoph Stritt, Elena L. Gimmi, Michele Wyler, Abdelmonaim H. Bakali, Aleksandra Skalska, Robert Hasterok, Luis A. J. Mur, Nicola Pecchioni, Anne C. Roulin
    Academic press:
    Molecular Ecology (rok: 2022, tom: 31, strony: 70-85), Wydawca: John Wiley & Sons Ltd
    Status:
    Published
    DOI:
    10.1111/mec.16207 - link to the publication
  7. Plant cell and organism development
    Authors:
    Robert Hasterok, Alexander Betekhtin
    Academic press:
    International Journal of Molecular Sciences (rok: 2020, tom: 21, strony: 5536 (1-10)), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms21165636 - link to the publication
  8. Brachypodium: Twenty years as a grass biology model system – the way forward?
    Authors:
    Robert Hasterok, Pilar Catalan, Samuel P. Hazen, Anne C. Roulin, John P. Vogel, Kai Wang, Luis A. J. Mur
    Academic press:
    Trends in Plant Science (rok: 2022, tom: 27, strony: 1002-1016), Wydawca: Elsevier Science London
    Status:
    Published
    DOI:
    10.1016/j.tplants.2022.04.008 - link to the publication

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