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Characteristics of ubiquitous bacteria of the genus Pectobacterium (plant pathogens) -identification of genes involved in the adaptation to the environment, the rapid spread of and changes in host plant

2015/17/B/NZ9/01730

Keywords

Descriptors

  • NZ9_8: Mikrobiologia środowiskowa
  • NZ1_10: Biologia drobnoustrojów
  • NZ2_2: Genomika, transkryptomika i epigenomika

Panel

NZ9 – Fundamentals of applied life sciences and biotechnology: agricultural, forestry, horticulture, animal production and fishery, food and nutrition sciences, industrial biosciences, environmental biotechnology and remediation

Host institution

Uniwersytet Gdański, Międzyuczelniany Wydział Biotechnologii Uniwersytetu Gdańskiego i Gdańskiego Uniwersytetu Medycznego

Voivodeship: pomorskie

Other projects carried out by the institution »

Principal investigator (from the host institution)

dr Małgorzata Waleron

Number of co-investigators in the project: 7

Call

OPUS 9 – announced on 2015-03-16

Amount awarded
643 120 PLN
Project start date
2016-01-25
Project end date
2020-01-24
Project duration
48 months (the same as in the proposal)
Project status
Project settled

Project description

Download the project description in a pdf file

Note — project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Equipment purchased [PL]

  1. Elektroporator. Cost: 52 000 PLN
  2. Licencje i aktualizacje programów bioinformatycznych (CLC Genomic WorkBench, Geneious i in.). Cost: 33 000 PLN
  3. Monitor do platformy obliczeniowej. Cost: 742 PLN
  4. Platforma obliczeniowa - komputer do obsługi programów bioinformatycznych.. Cost: 14 899 PLN
  5. Zestaw termomikiserów do płytek 96 dołkowych i probówek typu Eppendorf. Cost: 30 000 PLN

Information in the final report

Publication in academic press/journals (8)

  1. Pectobacterium parvum sp. nov., having a Salmonella SPI-1-like Type III secretion system and low virulence

    Authors:
    Miia Pasanen, Malgorzata Waleron, Thomas Schott, Ilse Cleenwerck, Agnieszka Misztak, Krzysztof Waleron, Leighton Pritchard, Ramadan Bakr, Yeshitila Degefu, Jan van der Wolf, Peter Vandamme, Minna Pirhonen
    Academic press:
    International Journal of Systematic and Evolutionary Microbiology (year: 2020, volume: 70, pages: ijsem004057), Publisher: Microbiology Society
    Status:
    Published
    DOI:
    10.1099/ijsem.0.004057 – link to the publication

  2. First Report of Candidatus Pectobacterium maceratum Causing Soft Rot of Potato in Poland.

    Authors:
    M Waleron, AE Misztak, J Jonca, M Furmaniak, MM Waleron, KF Waleron
    Academic press:
    Plant Disease (year: 2019, volume: 3, pages: 1409-1410), Publisher: The American Phytopathological Society (APS)
    Status:
    Published
    DOI:
    10.1094/PDIS-10-18-1849-PDN – link to the publication

  3. European Population of Pectobacterium punjabense: Genomic Diversity, Tuber Maceration Capacity and a Detection Tool for This Rarely Occurring Potato Pathogen

    Authors:
    Cigna,J.;Laurent,A.; Waleron, M.; Waleron, K.; Dewaegeneire, P.; van der Wolf, J.; Andrivon, D.; Faure, D.; Hélias, V.
    Academic press:
    Microorganisms (year: 2021, volume: 9(4), pages: 781), Publisher: MDPI
    Status:
    Published

  4. Pectobacterium polonicum sp. nov. isolated from vegetable fields in Northern Poland

    Authors:
    M. Waleron, A. Misztak1, M.M. Waleron, J. Jonca, M. Furmaniak, K. Waleron.
    Academic press:
    International Journal of Systematic and Evolutionary Microbiology (year: 2019, volume: 69, pages: 1751-1759), Publisher: the Microbiology Society
    Status:
    Published
    DOI:
    10.1099/ijsem.0.003387 – link to the publication

  5. Practical considerations in the application of a polypyridyl complex of Ru(II) in physiological and biochemical studies of Pectobacterium spp. and other bacteria

    Authors:
    Joanna Jonca, Aneta Stachowska; Agnieszka Chylewska; Katarzyna Turecka; Małgorzata Waleron; Krzysztof Waleron
    Academic press:
    Eruropean Journal of Plant Pathology (year: 2021, volume: 159, pages: 371–383), Publisher: Springer
    Status:
    Published
    DOI:
    10.1007/s10658-020-02168-6 – link to the publication

  6. Pectobacterium zantedeschiae sp. nov. a new species of a soft rot pathogen isolated from Calla lily (Zantedeschiae spp.).

    Authors:
    Malgorzata Waleron; Agnieszka E Misztak; Michal M Waleron; Bartosz Wielgomas, Artur Mikiciński, Krzysztof Waleron
    Academic press:
    Systematic and Applied Microbiology (year: 2019, volume: brak, pages: brak), Publisher: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.syapm.2018.08.004 – link to the publication

  7. First Report of Pectobacterium polaris Causing Soft Rot of Potato in Poland.

    Authors:
    M Waleron, A Misztak, J Jońca, K Waleron
    Academic press:
    Plant Disease (year: 2018, volume: 103, pages: 144), Publisher: The American Phytopathological Society (APS)
    Status:
    Published
    DOI:
    10.1094/PDIS-05-18-0861-PDN – link to the publication

  8. Transfer of Pectobacterium carotovorum subsp. carotovorum strains isolated from potatoes grown at high altitudes to Pectobacterium peruviense sp. nov.

    Authors:
    Malgorzata Waleron, Agnieszka Misztak, Michal Waleron, Martyna Franczuk,Bartosz Wielgomas, Krzysztof Waleron
    Academic press:
    Systematic and Applied Microbiology (year: 2018, volume: 41, pages: 85-93), Publisher: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.syapm.2017.11.005 – link to the publication

Articles in post-conference publications (1)

  1. Nowe gatunki Pectobacterium i ich występowanie w Polsce.

    Authors:
    M Waleron, A Misztak, J Jońca, K Waleron
    Conference:
    Aktualne kierunki badań nad chorobami bakteryjnymi roślin w Polsce (year: 2018, pages: 39-41), Publisher: Komitet Nauk Agronomicznych PAN Polskie Towarzystwo Fitopatologiczne, Sekcja Bakteryjnych Chorób Roślin
    Date:
    conference 18 października 2018
    Status:
    Published

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