Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Describing the genome-wide distribution of copy number variations in various breeds of domestic cattle based on the next-generation sequencing data of 121 individuals

2014/15/N/NZ9/03914

Keywords:

copy number variations CNV next-generation sequencing domestic cattle

Descriptors:

  • NZ9_2: Animal production

Panel:

NZ9 - Fundamentals of applied life sciences and biotechnology: agricultural, forestry, horticulture, animal production and fishery, food and nutrition sciences, industrial biosciences, environmental biotechnology and remediation

Host institution :

Uniwersytet Przyrodniczy we Wrocławiu, Wydział Biologii i Hodowli Zwierząt

woj. dolnośląskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

Magda Mielczarek 

Number of co-investigators in the project: 2

Call: PRELUDIUM 8 - announced on 2014-09-15

Amount awarded: 50 000 PLN

Project start date (Y-m-d): 2015-08-10

Project end date (Y-m-d): 2016-10-09

Project duration:: 14 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. Pamięć RAM (32 GB) (3 000 PLN)
  2. Dyski twarde (4x1TB) (7 999 PLN)

Information in the final report

  • Publication in academic press/journals (2)
  • Articles in post-conference publications (2)
  1. Landscape of Copy Number Variations in Bos taurus: individual – and inter-breed variability
    Authors:
    M. Mielczarek, M. Frąszczak, J. Williams, EL Nicolazzi, J. Szyda
    Academic press:
    BMC Genomics (rok: 2018, tom: 19, strony: 410), Wydawca: Springer
    Status:
    Published
    DOI:
    10.1186/s12864-018-4815-6 - link to the publication
  2. Analysis of Copy Number Variations in Holstein-Friesian Cow Genomes Based on Whole Genome Sequence Data
    Authors:
    M. Mielczarek, M. Frąszczak, R. Giannico, G. Minozzi, J. L. Williams, K. Wojdak-Maksymiec, J. Szyda
    Academic press:
    JOURNAL OF DAIRY SCIENCE (rok: 2017, tom: 100, strony: 5515-5525), Wydawca: ELSEVIER SCIENCE INC
    Status:
    Published
    DOI:
    10.3168/jds.2016-11987 - link to the publication
  1. NGS-based analysis of copy number variations in various cattle breeds
    Authors:
    M. Mielczarek, M. Fraszczak, E. L. Nicolazzi, G. Minozzi, H. Schwarzenbacher, C. Egger-Danner, D. Vicario, F. Seefried, A. Rossoni, T. Solberg, L. Varona, C. Diaz, C. Ferrandi, R. Giannico, J. L. Williams, J. Woolliams, J. Szyda
    Conference:
    BioInformatics in Torun 2016 (rok: 2016, ), Wydawca: brak
    Data:
    konferencja 16-18 czerwca
    Status:
    Published
  2. NGS-based analysis of copy number variations in various cattle breeds
    Authors:
    M. Mielczarek, M. Fraszczak, E. L. Nicolazzi, G. Minozzi, H. Schwarzenbacher, C. Egger-Danner, D. Vicario, F. Seefried, A. Rossoni, T. Solberg, L. Varona, C. Diaz, C. Ferrandi, R. Giannico, J. L. Williams, J. Woolliams, J. Szyda
    Conference:
    67th Annual Meeting of the European Federation of Animal Science; EAAP 2016 (rok: 2016, ), Wydawca: Wageningen Academic Publishers
    Data:
    konferencja 29 sierpnia – 2 września
    Status:
    Published

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