Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Identification of circular RNAs and protein factors involved in their biogenesis in a model plant, Arabidopsis thaliana

2014/15/D/NZ2/02305

Keywords:

circRNA circular RNA splicing non-canonical splicing RNA-seq NGS

Descriptors:

  • NZ2_2: Genomics, transcriptomics, epigenomics
  • NZ2_7: Bioinformatics
  • NZ2_9: Systems biology

Panel:

NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution :

Instytut Chemii Bioorganicznej PAN

woj. wielkopolskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr Anna Philips 

Number of co-investigators in the project: 4

Call: SONATA 8 - announced on 2014-09-15

Amount awarded: 892 110 PLN

Project start date (Y-m-d): 2015-07-21

Project end date (Y-m-d): 2019-07-20

Project duration:: 48 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. Komputer PC z oprogramowaniem (15 000 PLN)

Information in the final report

  • Publication in academic press/journals (4)
  1. Arabidopsis thaliana cbp80, c2h2, and flk Knockout Mutants Accumulate Increased Amounts of Circular RNAs.
    Authors:
    Philips A, Nowis K, Stelmaszczuk M, Podkowiński J, Handschuh L, Jackowiak P, Figlerowicz M
    Academic press:
    Cells (rok: 2020, tom: 9(9), strony: E1937), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/cells9091937 - link to the publication
  2. Expression landscape of circRNAs in Arabidopsis thaliana seedlings and adult tissues
    Authors:
    Philips A, Nowis K, Stelmaszczuk M, Jackowiak P, Podkowiński J,Handschuh L, Figlerowicz M.
    Academic press:
    Frontiers in Plant Science (rok: 2020, tom: 11, strony: 576581), Wydawca: Frontiers
    Status:
    Published
    DOI:
    10.3389/fpls.2020.576581 - link to the publication
  3. Global Increase in Circular RNA Levels in Myotonic Dystrophy
    Authors:
    Czubak K., Taylor K., Piasecka A., Sobczak K., Kozlowska K., Philips A., Sedehizadeh S., Brook JD., Wojciechowska M., Kozlowski P.
    Academic press:
    Frontiers Genetics (rok: 2019, tom: 10, strony: 649), Wydawca: Frontiers Media SA
    Status:
    Published
    DOI:
    10.3389/fgene.2019.00649 - link to the publication
  4. At-C-RNA database, a one-stop source for information on circRNAs in Arabidopsis thaliana in a unified format.
    Authors:
    Nowis K, Jackowiak P, Figlerowicz M, Philips A.
    Academic press:
    Database , Wydawca: Oxford
    Status:
    Submitted
    DOI:
    brak - link to the publication

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