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Information on the principal investigator and host institution

Information of the project and the call

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CDKG/Ph1: is there a common process that regulates genomic stability in the grass species?

2014/14/M/NZ2/00519

Keywords:

allopolyploidy Brachypodium hybridum CDK chromosome pairing control grasses homoeologous chromosomes model organism Ph1 locus meiosis molecular cytogenetics mutants wheat

Descriptors:

  • NZ2_5: Cell genetics
  • NZ2_1: Molecular genetics
  • NZ3_1: Cell biology

Panel:

NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution :

Uniwersytet Śląski w Katowicach, Wydział Nauk Przyrodniczych

woj. śląskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

prof. Robert Hasterok 

Number of co-investigators in the project: 10

Call: HARMONIA 6 - announced on 2014-06-16

Amount awarded: 1 995 175 PLN

Project start date (Y-m-d): 2015-05-08

Project end date (Y-m-d): 2019-11-07

Project duration:: 54 months (the same as in the proposal)

Project status: Project settled

Information in the final report

  • Publication in academic press/journals (14)
  1. CDKG1 is required for meiotic and somatic recombination intermediate processing in Arabidopsis
    Authors:
    Candida Nibau, Andrew Lloyd, Despoina Dadarou, Alexander Betekhtin, Foteini Tsilimigka, Dylan W. Phillips, John H. Doonan
    Academic press:
    Plant Cell (rok: 2020, tom: 32, strony: 1308–1322), Wydawca: American Society of Plant Biologists
    Status:
    Published
    DOI:
    10.1105/tpc.19.00942 - link to the publication
  2. Comparatively barcoded chromosomes of Brachypodium perennials tell the story of their karyotype structure and evolution
    Authors:
    Joanna Lusinska, Alexander Betekhtin, Diana Lopez-Alvarez, Pilar Catalan, Glyn Jenkins, Elzbieta Wolny, Robert Hasterok
    Academic press:
    International Journal of Molecular Sciences (rok: 2019, tom: 20, strony: 3390 (1-19)), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms20225557 - link to the publication
  3. Hydroxyproline-rich glycoproteins as markers of temperature stress in the leaves of Brachypodium distachyon
    Authors:
    Artur Pinski, Alexander Betekhtin, Katarzyna Sala, Kamila Godel-Jedrychowska, Ewa Kurczynska, Robert Hasterok
    Academic press:
    International Journal of Molecular Sciences (rok: 2019, tom: 20, strony: 2571 (1-21)), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms20102571 - link to the publication
  4. Plant Cell and Organism Development
    Authors:
    Robert Hasterok, Alexander Betekhtin
    Academic press:
    International Journal of Molecular Sciences (rok: 2020, tom: 21, strony: 5636 (1-10)), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms21165636 - link to the publication
  5. Progressive refinement of the karyotyping of Brachypodium genomes
    Authors:
    Robert Hasterok, Kai Wang, Glyn Jenkins
    Academic press:
    New Phytologist (rok: 2020, tom: 227, strony: 1668-1675), Wydawca: John Wiley & Sons
    Status:
    Published
    DOI:
    10.1111/nph.16342 - link to the publication
  6. Spatial distribution of selected chemical cell wall components in the embryogenic callus of Brachypodium distachyon
    Authors:
    Alexander Betekhtin, Magdalena Rojek, Anna Milewska-Hendel, Robert Gawecki, Jagna Karcz, Ewa Kurczynska, Robert Hasterok
    Academic press:
    PLos One (rok: 2016, tom: 11, strony: e0167426 (1-20)), Wydawca: Public Library od Science
    Status:
    Published
    DOI:
    10.1371/journal.pone.0167426 - link to the publication
  7. Gradual polyploid genome evolution revealed by a pan-genomic analysis of Brachypodium hybridum and its diploid progenitors
    Authors:
    Sean P. Gordon, Bruno Contreras-Moreira, Joshua J. Levy, Armin Djamei, Angelika Czedik-Eysenberg, Virginia S. Tartaglio, Adam Session, Joel Martin, Amy Cartwright, Andrew Katz, Vasanth R. Singan, Eugene Goltsman, Kerrie Barry, Vinh Ha Dinh-Thi, Boulos Chalhoub, Antonio Diaz-Perez, Ruben Sancho, Joanna Lusinska, Elzbieta Wolny, Candida Nibau, John H. Doonan, Luis Mur, Chris Plott, Jerry Jenkins, Samuel P. Hazen, Scott J. Lee, Shenquaing Shu, David Goodstein, Daniel Rokhsar, Jeremy Schmutz, Robert Hasterok, Pilar Catalan, John P. Vogel
    Academic press:
    Nature Communications (rok: 2020, tom: 11, strony: 3670 (1-16)), Wydawca: Nature Publishing Group
    Status:
    Published
    DOI:
    10.1038/s41467-020-17302-5 - link to the publication
  8. Cell wall epitopes and endoploidy as reporters of embryogenic potential in Brachypodium distachyon callus culture
    Authors:
    Alexander Betekhtin, Magdalena Rojek, Katarzyna Nowak, Artur Pinski, Anna Milewska-Hendel, Ewa Kurczynska, John H. Doonan, Robert Hasterok
    Academic press:
    International Journal of Molecular Sciences (rok: 2018, tom: 19, strony: 3811 (1-21)), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms19123811 - link to the publication
  9. Chromosome identification and reconstruction of evolutionary rearrangements in Brachypodium distachyon, B. stacei and B. hybridum
    Authors:
    Joanna Lusinska, Joanna Majka, Alexander Betekhtin, Karolina Susek, Elzbieta Wolny, Robert Hasterok
    Academic press:
    Annals of Botany (rok: 2018, tom: 122, strony: 445–459), Wydawca: Oxford University Press
    Status:
    Published
    DOI:
    10.1093/aob/mcy086 - link to the publication
  10. 5-azacitidine induces cell death in a tissue culture of Brachypodium distachyon
    Authors:
    Alexander Betekhtin, Anna Milewska-Hendel, Lukasz Chajec, Magdalena Rojek, Katarzyna Nowak, Jolanta Kwasniewska, Elzbieta Wolny, Ewa Kurczynska, Robert Hasterok
    Academic press:
    International Journal of Molecular Sciences (rok: 2018, tom: 19, strony: 1806 (1-21)), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms19061806 - link to the publication
  11. Organ and tissue-specific localisation of selected cell wall epitopes in the zygotic embryo of Brachypodium distachyon
    Authors:
    Alexander Betekhtin, Anna Milewska-Hendel, Joanna Lusinska, Lukasz Chajec, Ewa Kurczynska, Robert Hasterok
    Academic press:
    International Journal of Molecular Sciences (rok: 2018, tom: 19, strony: 725 (1-16)), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms19030725 - link to the publication
  12. Ribosomal DNA loci derived from Brachypodium stacei are switched off for major parts of the life cycle of Brachypodium hybridum
    Authors:
    Natalia Borowska-Zuchowska, Ewa Robaszkiewicz, Elzbieta Wolny, Alexander Betekhtin, Robert Hasterok
    Academic press:
    Journal of Experimental Botany (rok: 2019, tom: 70, strony: 805–815), Wydawca: Oxford University Press
    Status:
    Published
    DOI:
    10.1093/jxb/ery425 - link to the publication
  13. A CRISPR/Cas9-based mutagenesis protocol for Brachypodium distachyon and its allopolyploid relative, Brachypodium hybridum
    Authors:
    Karolina Hus, Alexander Betekhtin, Artur Pinski, Magdalena Rojek-Jelonek, Ewa Grzebelus, Candida Nibau, Mingjun Gao, Katja E. Jaeger, Glyn Jenkins, John H. Doonan, Robert Hasterok
    Academic press:
    Frontiers in Plant Science (rok: 2020, tom: 11, strony: 614 (1-21)), Wydawca: Frontiers Media S.A.
    Status:
    Published
    DOI:
    10.3389/fpls.2020.00614 - link to the publication
  14. In vitro Tissue Culture in Brachypodium: applications and gaps
    Authors:
    Alexander Betekhtin, Karolina Hus, Magdalena Rojek, Ewa Kurczynska, Candida Nibau, John H. Doonan, Robert Hasterok
    Academic press:
    International Journal of Molecular Sciences (rok: 2020, tom: 21, strony: 1037 (1-16)), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms21031037 - link to the publication

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