Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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From junk to treasure - functional evolution of retrogenes

2013/11/B/NZ2/02598

Keywords:

evolutionary genomics retrogenes expression analysis gene function prediction

Descriptors:

  • NZ2_2: Genomics, transcriptomics, epigenomics
  • NZ2_7: Bioinformatics

Panel:

NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution :

Uniwersytet im. Adama Mickiewicza w Poznaniu, Wydział Biologii

woj. wielkopolskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

prof. Izabela Makałowska 

Number of co-investigators in the project: 4

Call: OPUS 6 - announced on 2013-09-16

Amount awarded: 697 600 PLN

Project start date (Y-m-d): 2014-07-10

Project end date (Y-m-d): 2018-07-09

Project duration:: 48 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. Komputer (6 000 PLN)
  2. rotator, talerz, vortex mixer (3 206 PLN)
  3. chłodziarko-zamrażarka.
  4. kuchenka mikrofalowa.
  5. Termocykler (60 000 PLN)
  6. blok grzejny.
  7. monitor do komputera.
  8. wirówka.
  9. zamrażarka.
  10. Drukarka sieciowa - urządzenie wielofunkcyjne (5 000 PLN)
  11. Waga laboratoryjna.
  12. serwer plików z dyskami.
  13. wytrząsarka.

Information in the final report

  • Publication in academic press/journals (5)
  1. Retroposition as a source of antisense long non-coding RNAs with possible regulatory functions.
    Authors:
    Bryzghalov O, Szcześniak MW, Makałowska I.
    Academic press:
    Acta Biochimica Polonica (rok: 2016, tom: 63(4), strony: 825-833), Wydawca: The Journal of the Polish Biochemical Society
    Status:
    Published
    DOI:
    10.18388/abp.2016_1354 - link to the publication
  2. Complex analysis of retroposed genes' contribution to human genome, proteome and transcriptome
    Authors:
    Magdalena Regina Kubiak, Michał Wojciech Szcześniak, Izabela Makałowska
    Academic press:
    Genes (rok: 2020, tom: 11(5), strony: 542), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/genes11050542 - link to the publication
  3. Protein-coding genes' retrocopies and their functions
    Authors:
    Kubiak MR., Makałowska I.
    Academic press:
    Viruses (rok: 2017, tom: 13;9(4), strony: e80), Wydawca: MDPI AG
    Status:
    Published
    DOI:
    http://www.mdpi.com/1999-4915/9/4/80 - link to the publication
  4. Inter-population Differences in Retrogene Loss and Expression in Humans
    Authors:
    Kabza, M., M. R. Kubiak, A. Danek, W. Rosikiewicz, S. Deorowicz, A. Polanski and I. Makalowska
    Academic press:
    PLoS Genetics (rok: 2015, tom: 11, strony: e1005579), Wydawca: PLOS
    Status:
    Published
    DOI:
    10.1371/journal.pgen.1005579 - link to the publication
  5. RetrogeneDB – a database of plant and animal retrocopies
    Authors:
    Rosikiewicz W., Kabza M., Kosiński J., Ciomborowska J., Kubiak RM., Makałowska I
    Academic press:
    Database - The Journal of Biological Databases and Curation (rok: 2017, tom: 2017, strony: 0), Wydawca: OXFORD UNIV PRESS
    Status:
    Published
    DOI:
    10.1093/database/bax038 - link to the publication

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