Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

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Kinesin in motion relatively to tubulin - properties of solvation water and interactions between proteins

2013/09/D/NZ1/01087

Keywords:

computer simulations molecular dynamics water protein kinesin solwation

Descriptors:

  • NZ1_1: Molecular biology
  • NZ1_3: Biophysics

Panel:

NZ1 - Molecular biology, structural biology, biotechnology: molecular biology, structural biology, biotechnology

Host institution :

Politechnika Gdańska, Wydział Chemiczny

woj. pomorskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr Anna Kuffel 

Number of co-investigators in the project: 1

Call: SONATA 5 - announced on 2013-03-15

Amount awarded: 87 720 PLN

Project start date (Y-m-d): 2014-02-10

Project end date (Y-m-d): 2017-02-09

Project duration:: 36 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. urządzenie pamięci masowej NAS (30 000 PLN)

Information in the final report

  • Publication in academic press/journals (4)
  • Articles in post-conference publications (1)
  1. The significance of the properties of water for the working cycle of the kinesin molecular motor
    Authors:
    Anna Kuffel, Monika Szałachowska
    Academic press:
    The Journal of Chemical Physics (rok: 2018, tom: 148, strony: 235101 (1-15)), Wydawca: American Institute of Physics (AIP) Publishing
    Status:
    Published
    DOI:
    10.1063/1.5020208 - link to the publication
  2. How water mediates the long-range interactions between remote protein molecules
    Authors:
    Anna Kuffel
    Academic press:
    Physical Chemistry Chemical Physics (rok: 2017, tom: 19, strony: 5441-5448), Wydawca: Royal Society of Chemistry
    Status:
    Published
    DOI:
    10.1039/c6cp05788h - link to the publication
  3. Water-mediated long-range interactions between the internal vibrations of remote proteins
    Authors:
    Anna Kuffel, Jan Zielkiewicz
    Academic press:
    Physical Chemistry Chemical Physics (rok: 2015, tom: 17, strony: 6728-6733), Wydawca: Royal Society of Chemistry
    Status:
    Published
    DOI:
    10.1039/C5CP00090D - link to the publication
  4. Water-mediated influence of a crowded environment on internal vibrations of a protein molecule
    Authors:
    Anna Kuffel, Jan Zielkiewicz
    Academic press:
    Physical Chemistry Chemical Physics (rok: 2016, tom: 18, strony: 4881-4890), Wydawca: Royal Society of Chemistry
    Status:
    Published
    DOI:
    10.1039/c5cp07628e - link to the publication
  1. An interplay between the dynamics of water and the inner dynamics of the kinesin head approaching the tubulin dimer
    Authors:
    Anna Kuffel
    Conference:
    Microtubules: From Atoms to Complex Systems (rok: 2016, ), Wydawca: The European Molecular Biology Laboratory
    Data:
    konferencja 29.05.2016-01.06.2016
    Status:
    Published

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