Projects search

2D and 3D FISH of expanded repeat RNAs in human lymphoblasts

Authors:

Urbanek MO, Michalak M, Krzyzosiak WJ

Academic press:

Methods (year: 2017, volume: 120, pages: 49-57), Publisher: Elsevier

Status:

Published

DOI:

10.1016/j.ymeth.2017.04.002 – link to the publication

Modeling simple repeat expansion diseases with iPSC technology

Authors:

Jaworska E, Kozlowska E, Switonski PM, Krzyzosiak WJ

Academic press:

Cellular and Molecular Life Sciences (year: 2016, volume: 73, pages: 4085-4100), Publisher: Springer

Status:

Published

DOI:

10.1007/s00018-016-2284-0 – link to the publication

Identifying proteins that bind to specific RNAs - focus on simple repeat expansion diseases

Authors:

Jazurek M, Ciesiolka A, Starega-Roslan J, Bilinska K, Krzyzosiak WJ

Academic press:

Nucleic Acids Research (year: 2016, volume: 44, pages: 9050-9070), Publisher: OXFORD ACADEMIC

Status:

Published

DOI:

10.1093/nar/gkw803 – link to the publication

Reduction of Huntington's Disease RNA Foci by CAG Repeat-Targeting Reagents

Authors:

Urbanek MO, Fiszer A, Krzyzosiak WJ

Academic press:

Frontiers in Cellular Neuroscience (year: 2017, volume: 11, pages: 82), Publisher: Frontiers Media SA

Status:

Published

DOI:

10.3389/fncel.2017.00082 – link to the publication

Generation of human iPS cell line IBCHi002-A from spinocerebellar ataxia type 3/Machado-Joseph disease patient's fibroblasts

Authors:

Agata Ciolak, Wlodzimierz J Krzyzosiak, Emilia Kozlowska, Agnieszka Fiszer

Academic press:

Stem Cell Research (year: 2020, volume: 45, pages: 101796), Publisher: Elsevier

Status:

Published

DOI:

10.1016/j.scr.2020.101796 – link to the publication

RAN Translation of the Expanded CAG Repeats in the SCA3 Disease Context

Authors:

Magdalena Jazurek-Ciesiolka, Adam Ciesiolka, Alicja A.Komur, Martyna O.Urbanek-Trzeciak, Wlodzimierz J.Krzyzosiak, AgnieszkaFiszer

Academic press:

Journal of Molecular Biology (year: 2020, volume: 432, pages: 166699), Publisher: Elsevier

Status:

Published

DOI:

10.1016/j.jmb.2020.10.033 – link to the publication

miRNAmotif—A Tool for the Prediction of Pre-miRNA–Protein Interactions

Authors:

Urbanek-Trzeciak MO, Jaworska E, Krzyzosiak WJ

Academic press:

International Journal of Molecular Sciences (year: 2018, volume: 19, pages: 4075), Publisher: MDPI

Status:

Published

DOI:

10.3390/ijms19124075 – link to the publication

Structural Characteristics of Simple RNA Repeats Associated with Disease and their Deleterious Protein Interactions

Authors:

Ciesiolka A, Jazurek M, Drazkowska K, Krzyzosiak WJ

Academic press:

Frontiers in Cellular Neuroscience (year: 2017, volume: 11, pages: 97), Publisher: Frontiers Media SA

Status:

Published

DOI:

10.3389/fncel.2017.00097 – link to the publication

Discriminating RNA variants with single-molecule allele-specific FISH

Authors:

Urbanek MO, Krzyzosiak WJ

Academic press:

Mutation Research. Reviews in Mutation Research (year: 2017, volume: 773, pages: 230-241), Publisher: Elsevier

Status:

Published

DOI:

10.1016/j.mrrev.2016.09.003 – link to the publication

Nuclear speckles: molecular organization, biological function and role in disease

Authors:

Galganski L, Urbanek MO, Krzyzosiak WJ

Academic press:

Nucleic Acids Research (year: 2017, volume: 45, pages: 10350-10368), Publisher: Oxford University Press

Status:

Published

DOI:

10.1093/nar/gkx759 – link to the publication

Small RNA Detection by in Situ Hybridization Methods

Authors:

Urbanek MO, Nawrocka AU, Krzyzosiak WJ.

Academic press:

International Journal of Molecular Sciences (year: 2015, volume: 16(6), pages: 13259-13286), Publisher: MDPI AG

Status:

Published

DOI:

10.3390/ijms160613259 – link to the publication

The role of the immune system in triplet repeat expansion diseases.

Authors:

Olejniczak M, Urbanek MO, Krzyzosiak WJ.

Academic press:

Mediators of Inflammation (year: 2015, volume: -, pages: 873860), Publisher: HINDAWI PUBLISHING CORPORATION

Status:

Published

DOI:

10.1155/2015/873860 – link to the publication

Current understanding of the role of microRNAs in spinocerebellar ataxias

Authors:

Edyta Koscianska and Wlodzimierz J Krzyzosiak

Academic press:

Cerebellum and Ataxias (year: 2014, volume: 0,0465277777777778, pages: bd), Publisher: BioMed Central

Status:

Published

DOI:

10.1186/2053-8871-1-7 – link to the publication

Sequence-non-specific effects generated by various types of RNA interference triggers

Authors:

Olejniczak M, Urbanek MO, Jaworska E, Witucki L, Szczesniak MW, Makalowska I, Krzyzosiak WJ.

Academic press:

Biochimica et Biophysica Acta (year: 2015, volume: 1859(2), pages: 306–314), Publisher: Elsevier

Status:

Published

DOI:

10.1016/j.bbagrm.2015.11.005 – link to the publication

Cooperation meets competition in microRNA-mediated DMPK transcript regulation

Authors:

Koscianska E, Witkos TM, Kozlowska E, Wojciechowska M, Krzyzosiak WJ

Academic press:

Nucleic Acids Research (year: 2015, volume: 43, pages: 9500-9518), Publisher: OXFORD UNIV PRESS

Status:

Published

DOI:

10.1093/nar/gkv849 – link to the publication

In Vitro Expansion of CAG, CAA, and Mixed CAG/CAA Repeats

Authors:

Figura G, Koscianska E, Krzyzosiak WJ.

Academic press:

International Journal of Molecular Sciences (year: 2015, volume: 16(8), pages: 18741-18751), Publisher: MDPI AG

Status:

Published

DOI:

10.3390/ijms160818741 – link to the publication

Nuclear speckles are detention centers for transcripts containing expanded CAG repeats

Authors:

Urbanek MO, Jazurek M, Switonski PM, Figura G, Krzyzosiak WJ

Academic press:

Biochimica et Biophysica Acta - Molecular Basis of Disease (year: 2016, volume: 1862, pages: 1513-1520), Publisher: ELSEVIER

Status:

Published

DOI:

10.1016/j.bbadis.2016.05.015 – link to the publication

siRNA release from pri-miRNA scaffolds is controlled by the sequence and structure of RNA

Authors:

Galka-Marciniak P, Olejniczak M, Starega-Roslan J, Szczesniak MW, Makalowska I, Krzyzosiak WJ

Academic press:

Biochimica et Biophysica Acta - Gene Regulatory Mechanisms (year: 2016, volume: 1859, pages: 639-649), Publisher: ELSEVIER

Status:

Published

DOI:

10.1016/j.bbagrm.2016.02.014 – link to the publication

RNA FISH for detecting expanded repeats in human diseases

Authors:

Urbanek MO, Krzyzosiak WJ

Academic press:

Methods (year: 2015, volume: 2015, pages: S1046-2023), Publisher: Elsevier

Status:

Published

DOI:

10.1016/j.ymeth.2015.11.017 – link to the publication

RAN translation and frameshifting as translational challenges at simple repeats of human neurodegenerative disorders

Authors:

Wojciechowska M, Olejniczak M, Galka-Marciniak P, Jazurek M, Krzyzosiak WJ

Academic press:

Nucleic Acids Research (year: 2014, volume: 42(19), pages: 11849-64), Publisher: Oxford Univ Press

Status:

Published

DOI:

10.1093/nar/gku794 – link to the publication

RNA imaging in living cells - methods and applications

Authors:

Urbanek MO, Galka-Marciniak P, Olejniczak M, Krzyzosiak WJ

Academic press:

RNA Biology (year: 2014, volume: 3;11(8), pages: 1083-95), Publisher: Landes Bioscience

Status:

Published

DOI:

10.4161/rna.35506 – link to the publication

MicroRNA deregulation in trinucleotide repeat expansion disorders

Authors:

Koscianska E, Kozlowska E, Jaworska E, Krzyzosiak WJ.

Book:

Applied RNAi: From Fundamental Research to Therapeutic Applications (year: 2014, volume: bd, pages: 227-246), Publisher: Caister Academic Press

Status:

Published