Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Association genetics of nucleotide polymorphisms related to adaptive variation and population history in the European range of pine species Pinus sylvestris and Pinus mugo.

2012/05/E/NZ9/03476

Keywords:

molecular population genetics molecular markers SNPs natural selection

Descriptors:

  • NZ9_3: Forestry
  • NZ9_12: Conservation of genetic resources

Panel:

NZ9 - Fundamentals of applied life sciences and biotechnology: agricultural, forestry, horticulture, animal production and fishery, food and nutrition sciences, industrial biosciences, environmental biotechnology and remediation

Host institution :

Instytut Dendrologii PAN

woj. wielkopolskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr hab. Witold Wachowiak 

Number of co-investigators in the project: 4

Call: SONATA BIS 1 - announced on 2012-03-15

Amount awarded: 1 486 000 PLN

Project start date (Y-m-d): 2013-03-12

Project end date (Y-m-d): 2019-10-11

Project duration:: 79 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. Wirówka typy Eppendorf 5804R z rotorem na mikropłytki (AZDWP) i aerozoloszczelnym rotorem na probówki typu Eppendorf (F453011) (33 000 PLN)
  2. Zestaw komputerowy (9 766 PLN)
  3. Trzy komputery o odpowiedniej mocy (typu Dell Latitude - E6220) z oprzyrządowaniem (3 szt.) (17 490 PLN)
  4. oprogramowanie komputerowe CodonCode Aligner.
  5. Pakiet komputerowy ENDNOTE (5 510 PLN)
  6. Termocykler (typu DNA Engine Biorad C1000 Touch) (48 000 PLN)
  7. termowytrząsarka (termomixer).
  8. zestaw komputerowy (komputer z drukarką).

Information in the final report

  • Publication in academic press/journals (17)
  1. High genetic similarity between Polish and North European Scots pine (Pinus sylvestris L.) populations at nuclear gene loci.
    Authors:
    Wachowiak, Witold; Wόjkiewicz, Błażej; Cavers, Stephen; Lewandowski, Andrzej
    Academic press:
    Tree Genetics & Genomes (rok: 2014, tom: 10, strony: 10: 1015-1025), Wydawca: Springer Berlin Heidelberg
    Status:
    Published
    DOI:
    10.1007/s11295-014-0739-8 - link to the publication
  2. Interspecific gene flow and ecological selection in a pine (Pinus sp.) contact zone.
    Authors:
    Wachowiak Witold, Stephen Cavers, Weronika B. Żukowska.
    Academic press:
    Plant Systematics and Evolution (rok: 2014, tom: 12, strony: 45301), Wydawca: Springer Vienna
    Status:
    Published
    DOI:
    10.1007/s00606-014-1182-x - link to the publication
  3. Utility of closely related taxa for genetic studies of adaptive variation and speciation: Current state and perspectives in plants with focus on forest tree species.
    Authors:
    Weronika B. Żukowska, Witold Wachowiak
    Academic press:
    Journal of Systematics and Evolution (rok: 2016, tom: 54, strony: 17-28), Wydawca: Wiley
    Status:
    Published
    DOI:
    10.1111/jse.12177 - link to the publication
  4. Contrasting patterns of genetic variation in core and peripheral populations of highly outcrossing and wind pollinated forest tree species.
    Authors:
    Wójkiewicz B., Litkowiec M., Wachowiak W.
    Academic press:
    AoB Plants (rok: 2016, tom: 8, strony: plw054), Wydawca: Oxford Academic
    Status:
    Published
    DOI:
    10.1093/aobpla/plw054 - link to the publication
  5. Cross-amplification and multiplexing of cpSSRs and nSSRs in two closely related pine species (Pinus sylvestris L. and P. mugo Turra).
    Authors:
    Żukowska WB., Wójkiewicz B., Litkowiec M., Wachowiak W.
    Academic press:
    Dendrobiology (rok: 2017, tom: 77, strony: 59-64), Wydawca: Bogucki Wydawnictwo Naukowe S.C.
    Status:
    Published
    DOI:
    10.12657/denbio.077.005 - link to the publication
  6. Heterogeneous patterns of genetic variation at nuclear genes and quantitative traits in Scots pine provenance trial.
    Authors:
    Hebda A., Wachowiak W.
    Academic press:
    Acta Societatis Botanicorum Poloniae (rok: 2019, tom: 88(2):3623., strony: 45305), Wydawca: Polish Botanical Society
    Status:
    Published
    DOI:
    10.5586/asbp.3623 - link to the publication
  7. Long-term growth performance and productivity of Scots pine (Pinus sylvestris L.) populations.
    Authors:
    Hebda AM., Wachowiak W., Skrzyszewski J.
    Academic press:
    Acta Societatis Botanicorum Poloniae (rok: 2017, tom: 86(1), strony: 3521), Wydawca: Polish Botanical Society
    Status:
    Published
    DOI:
    brak - link to the publication
  8. Reconstructing the plant mitochondrial genome for marker discovery: a case study using Pinus.
    Authors:
    Donnelly K., Cottrell J., Ennos RA., Vendramin GG., A'Hara S., King S. Perry A., Wachowiak W., Cavers S.
    Academic press:
    Molecular Ecology Resources (rok: 2017, tom: 17, strony: 943–954), Wydawca: Wiley
    Status:
    Published
    DOI:
    10.1111/1755-0998.12646 - link to the publication
  9. Zróżnicowanie fenotypowe i zmienność tła genetycznego polskich proweniencji sosny zwyczajnej
    Authors:
    Hebda A., Skrzyszewski J., Wachowiak W.
    Academic press:
    Sylwan (rok: 2017, tom: 161 (4), strony: 277-286), Wydawca: Polish Forestry Society
    Status:
    Published
    DOI:
    brak - link to the publication
  10. Early phenology and growth trait variation in closely related European pine species.
    Authors:
    Wachowiak W., Perry A., Donnelly K., Cavers S.
    Academic press:
    Ecology and Evolution (rok: 2018, tom: 8, strony: 655–666), Wydawca: Wiley
    Status:
    Published
    DOI:
    10.1002/ece3.3690 - link to the publication
  11. Hybridization in contact zone between temperate European pine species.
    Authors:
    Wachowiak W., Żukowska WB., Wójkiewicz B., Cavers S., Litkowiec M.
    Academic press:
    Tree Genetics & Genomes (rok: 2016, tom: 0,533333333333333, strony: 45303), Wydawca: Springer
    Status:
    Published
    DOI:
    10.1007/s11295-016-1007-x - link to the publication
  12. Substructuring of Scots pine in Europe based on polymorphism at chloroplast microsatellite loci.
    Authors:
    Wójkiewicz BW, Wachowiak W.
    Academic press:
    Flora (rok: 2016, tom: 220, strony: 142-149), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.flora.2016.03.005 - link to the publication
  13. Comparative transcriptomics of a complex of four European pine species.
    Authors:
    Witold Wachowiak, Urmi Trivedi, Annika Perry, Stephen Cavers
    Academic press:
    BMC Genomics (rok: 2015, tom: 0,829166666666667, strony: 45300), Wydawca: BioMed Central
    Status:
    Published
    DOI:
    10.1186/s12864-015-1401-z - link to the publication
  14. Comparison of range-wide chloroplast microsatellite and needle trait variation patterns in Pinus mugo Turra (dwarf mountain pine).
    Authors:
    Żukowska B. Weronika, Boratyńska Krystyna, Wachowiak Witold
    Academic press:
    iForest - Biogeosciences and Forestry (rok: 2017, tom: 10, strony: 250-258), Wydawca: Italian Society of Silviculture and Forest Ecology
    Status:
    Published
    DOI:
    10.3832/ifor1860-009 - link to the publication
  15. Current approaches and perspectives in population genetics of Scots pine (Pinus sylvestris L.).
    Authors:
    Wójkiewicz BW, Cavers S, Wachowiak W.
    Academic press:
    Forest Science (rok: 2016, tom: 62 (3), strony: 343-354), Wydawca: Society of American Foresters
    Status:
    Published
    DOI:
    10.5849/forsci.15-040 - link to the publication
  16. Genetic characteristics of Scots pine (Pinus sylvestris L.) in Poland and reference populations based on nuclear and chloroplast microsatellite loci markers.
    Authors:
    Hebda AM., Wójkiewicz B., Wachowiak W.
    Academic press:
    Silva Fennica (rok: 2017, tom: 51 (2), strony: 45308), Wydawca: Finnish Society of Forest Science
    Status:
    Published
    DOI:
    10.14214/sf.1721 - link to the publication
  17. Nuclear microsatellite markers reveal the low genetic structure of Pinus mugo Turra (dwarf mountain pine) populations in Europe
    Authors:
    Żukowska WB., Wachowiak W.
    Academic press:
    Plant Systematics and Evolution (rok: 2017, tom: 303, strony: 641-651), Wydawca: Springer
    Status:
    Published
    DOI:
    brak - link to the publication

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