Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Identification, biogenesis and functional analysis of tRNA-derived small RNAs in Arabidopsis thaliana

2011/03/B/NZ2/01416

Keywords:

small RNA gene regulation tRNA Arabidopsis thaliana

Descriptors:

  • NZ2_2: Genomics, transcriptomics, epigenomics
  • NZ2_7: Bioinformatics

Panel:

NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution :

Uniwersytet im. Adama Mickiewicza, Wydział Biologii

woj. wielkopolskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

prof. Wojciech Karłowski 

Number of co-investigators in the project: 5

Call: OPUS 2 - announced on 2011-09-15

Amount awarded: 580 300 PLN

Project start date (Y-m-d): 2012-08-13

Project end date (Y-m-d): 2015-08-12

Project duration:: 36 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. laptop.
  2. rozbudowa serwera, dysk macierzy.
  3. serwer obliczeniowy (78 000 PLN)
  4. stacja robocza (9 600 PLN)

Information in the final report

  • Publication in academic press/journals (4)
  1. Arabidopsis microRNA expression regulation in a wide range of abiotic stress responses
    Authors:
    Maria Barciszewska-Pacak, Kaja Milanowska, Katarzyna Knop, Dawid Bielewicz, Przemyslaw Nuc, Patrycja Plewka, Andrzej M. Pacak, Franck Vazquez, Wojciech Karlowski, Artur Jarmolowski, Zofia Szweykowska-Kulinska
    Academic press:
    Frontiers in Plant Science (rok: 2015, tom: 6, strony: 410), Wydawca: Frontiers Media S.A.
    Status:
    Published
    DOI:
    10.3389/fpls.2015.00410 - link to the publication
  2. Early origin and adaptive evolution of the GW182 protein family, the key component of RNA silencing in animals
    Authors:
    Andrzej Zielezinski, Wojciech M Karlowski
    Academic press:
    RNA Journal (rok: 2015, tom: 12, strony: 761), Wydawca: RNA Society
    Status:
    Published
    DOI:
    10.1080/15476286.2015.1051302 - link to the publication
  3. mirEX 2.0 - an integrated environment for expression profiling of plant microRNAs
    Authors:
    Andrzej Zielezinski, Jakub Dolata, Sylwia Alaba, Katarzyna Kruszka, Andrzej Pacak, Aleksandra Swida-Barteczka, Katarzyna Knop, Agata Stepien, Dawid Bielewicz, Halina Pietrykowska, Izabela Sierocka, Lukasz Sobkowiak, Alicja Lakomiak, Artur Jarmolowski, Zofia Szweykowska-Kulinska, Wojciech M. Karlowski
    Academic press:
    BMC Plant Biology (rok: 2015, tom: 15, strony: 144), Wydawca: BioMed Central Ltd
    Status:
    Published
    DOI:
    10.1186/s12870-015-0533-2 - link to the publication
  4. Integrative data analysis indicates an intrinsic disordered domain character of Argonaute-binding motifs
    Authors:
    Andrzej Zielezinski and Wojciech M. Karlowski*
    Academic press:
    Bioinformatics (rok: 2014, tom: 9, strony: 332-339), Wydawca: Oxfors Journals
    Status:
    Published
    DOI:
    10.1093/bioinformatics/btu666 - link to the publication

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