Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Hybrid, metagenome-based approach to assessing biodiversity and toxigenic potential of fungi in anthropogenic environments

2011/03/D/NZ2/01435

Keywords:

metagenome secondary metabolites mycotoxin biosynthesis evolution biodiversity horizontal gene transfer

Descriptors:

  • NZ2_7: Bioinformatics
  • NZ2_2: Genomics, transcriptomics, epigenomics
  • NZ8_1: Evolutionary biology

Panel:

NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution :

Instytut Genetyki Roślin PAN

woj. wielkopolskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr Grzegorz Koczyk 

Number of co-investigators in the project: 6

Call: SONATA 2 - announced on 2011-09-15

Amount awarded: 990 000 PLN

Project start date (Y-m-d): 2012-08-14

Project end date (Y-m-d): 2016-06-13

Project duration:: 46 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. Pułapka MicroBio (10 000 PLN)
  2. Serwer (40 000 PLN)
  3. Sprzęt do elektroforezy (20 000 PLN)
  4. Termocykler (50 000 PLN)
  5. Real time PCR (150 000 PLN)

Information in the final report

  • Publication in academic press/journals (2)
  • Articles in post-conference publications (8)
  1. The Distant Siblings—A Phylogenomic Roadmap Illuminates the Origins of Extant Diversity in Fungal Aromatic Polyketide Biosynthesis
    Authors:
    Koczyk G, Dawidziuk A, Popiel D
    Academic press:
    Genome Biology and Evolution (rok: 2015, tom: 7, strony: 3132-3154), Wydawca: Oxford University Press
    Status:
    Published
    DOI:
    10.1093/gbe/evv204 - link to the publication
  2. Assessing contamination of microalgal astaxanthin producer Haematococcus cultures with high resolution melting curve analysis
    Authors:
    Dawidziuk A, Popiel D, Luboińska M, Grzebyk M, Wiśniewski M, Koczyk G
    Academic press:
    Journal of Applied Genetics (rok: 2017, tom: 58, strony: 277), Wydawca: Springer
    Status:
    Published
    DOI:
    10.1007/s13353-016-0378-x - link to the publication
  1. The distant siblings – investigating the origins of secondary metabolite diversity
    Authors:
    Koczyk G., Dawidziuk A., Popiel D.
    Conference:
    COST 2014 - 2nd Annual Conference of the SUSTAIN Action (rok: 2014, ), Wydawca: COST 2014 - 2nd Annual Conference of the SUSTAIN Action
    Data:
    konferencja 15-17.10
    Status:
    Published
  2. Interactions between filamentous fungi found in agricultural and other anthropogenic environments
    Authors:
    Dawidziuk A, Popiel D, Koczyk G
    Conference:
    XVII Congress of European Mycologists (rok: 2015, ), Wydawca: XVII Congress of European Mycologists
    Data:
    konferencja 21-25.09
    Status:
    Published
  3. Metagenomowym palcem po (filogenomicznej) mapie - bezpośrednia charakteryzacja genów biosyntezy poliketydów w próbkach środowiskowych
    Authors:
    Koczyk G, Dawidziuk A, Popiel D, Wyrwa K
    Conference:
    II Ogólnopolskie Sympozjum Mikrobiologiczne "Metagenomy Różnych Środowisk" (rok: 2017, ), Wydawca: Instytut Agrofizyki im. Bohdana Dobrzańskiego Polskiej Akademii Nauk
    Data:
    konferencja 29-30.06.2017
    Status:
    Published
  4. Towards probing the toxigenic potential of fungal communities in environmental samples.
    Authors:
    Koczyk G,. Popiel D., Dawidziuk A
    Conference:
    11th Conference of the European Foundation for Plant Pathology (rok: 2014, ), Wydawca: 11th Conference of the European Foundation for Plant Pathology
    Data:
    konferencja 8-13.09
    Status:
    Published
  5. Detecting mycotoxin producers in environmental samples via phylogeny-based preamplification and sequencing protocol
    Authors:
    Koczyk G, Popiel D, Dawidziuk A
    Conference:
    37th Mycotoxin Workshop (rok: 2015, ), Wydawca: 37th Mycotoxin Workshop
    Data:
    konferencja 1-3.07
    Status:
    Published
  6. Growth on the graveyard of chemical warfare - the plasticity of aromatic polyketide biosynthesis in higher fungi
    Authors:
    Koczyk G, Dawidziuk A, Popiel D
    Conference:
    XVII Congress of European Mycologists (rok: 2015, ), Wydawca: XVII Congress of European Mycologists
    Data:
    konferencja 21-25.09
    Status:
    Published
  7. The (not so) secret history of non-reducing polyketide synthase diversity.
    Authors:
    Koczyk G,. Dawidziuk A., Popiel D.
    Conference:
    12th European Conference On Fungal Genetics (rok: 2014, ), Wydawca: 12th European Conference On Fungal Genetics
    Data:
    konferencja 23-27.03
    Status:
    Published
  8. Zearalenone detoxification and evolution of lactonase activity in fungi.
    Authors:
    Popiel D., Koczyk G., Dawidziuk A., Gromadzka K., Błaszczyk L., Chełkowski J.
    Conference:
    The 36th Mycotoxin Workshop (rok: 2014, ), Wydawca: The 36th Mycotoxin Workshop
    Data:
    konferencja 16-18.06
    Status:
    Published

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