Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Metagenomic studies of plasmids derived from environmental samples

2011/01/D/NZ2/04817

Keywords:

metagenomic plasmid replication origin

Descriptors:

  • NZ2_2: Genomics, transcriptomics, epigenomics
  • NZ2_7: Bioinformatics

Panel:

NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution :

Uniwersytet Gdański, Wydział Biologii

woj. pomorskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr Joanna Łoś 

Number of co-investigators in the project: 2

Call: SONATA 1 - announced on 2011-03-15

Amount awarded: 907 500 PLN

Project start date (Y-m-d): 2011-12-21

Project end date (Y-m-d): 2016-12-20

Project duration:: 60 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. Blok grzejny (3 500 PLN)
  2. System dod dokumentacji żeli (25 000 PLN)
  3. Termocykler gradientowy.
  4. Wirówka z chłodzeniem (20 000 PLN)
  5. Komputer (4 000 PLN)
  6. Wytrząsarka mikrobiologiczna (10 000 PLN)

Information in the final report

  • Publication in academic press/journals (7)
  • Articles in post-conference publications (7)
  1. The Arctic soil bacterial communities in the vicinity of a little auk colony
    Authors:
    Sylwia Zielińska, Dorota Kidawa, Lech Stempniewicz, Marcin Łoś, Joanna M. Łoś
    Academic press:
    Frontiers in Microbiology (rok: 2016, tom: 7, strony: 45300), Wydawca: Frontiers Media S.A.
    Status:
    Published
    DOI:
    10.3389/fmicb.2016.01298 - link to the publication
  2. The most widespread problems in the function-based microbal metagenomics
    Authors:
    Agnieszka Felczykowska, Anna Krajewska, Sylwia Zielińska, Joanna M. Łoś, Sylwia Bloch, Bożena Nejman-Faleńczyk
    Academic press:
    Acta Biochimi. Pol. (rok: 2015, tom: 62, strony: brak), Wydawca: Polskie Towarzystwo Biochemiczne
    Status:
    Published
    DOI:
    10.18388/abp.2014_917 - link to the publication
  3. DNA extracted from faeces as a source of information about endemic reindeer from the High Arctic: detection of Shiga toxin genes and the analysis of reindeer male-specific DNA
    Authors:
    Sylwia Zielińska, Dorota Kidawa, Lech Stempniewicz, Marcin Łoś, Joanna M. Łoś
    Academic press:
    Polar Biology (rok: 2016, tom: nie dotyczy, strony: nie dotyczy), Wydawca: Springer Link
    Status:
    Published
    DOI:
    10.1007/s00300-016-1990-2 - link to the publication
  4. New Insights into the Microbiota of the Svalbard Reindeer Rangifer tarandus platyrhynchus
    Authors:
    Sylwia Zielińska, Dorota Kidawa, Lech Stempniewicz, Marcin Łoś and Joanna M. Łoś
    Academic press:
    Frontiers in Microbiology (rok: 2016, tom: 7, strony: 170), Wydawca: Frontiers Media S.A.
    Status:
    Published
    DOI:
    10.3389/fmicb.2016.00170 - link to the publication
  5. Microbial community composition in a phosphogypsum waste heap soil
    Authors:
    Sylwia Zielińska, Piotr Radkowski, Tadeusz Ossowski, Agnieszka Ludwig-Gałęzowska, Joanna M Łoś, Marcin Łoś
    Academic press:
    FEMS Microbiology Ecology (rok: 2017, tom: nie dotyczy, strony: nie dotyczy), Wydawca: Oxford University Press
    Status:
    Submitted
    DOI:
    nie - link to the publication
  6. Sampling, metadata and DNA extraction – important steps in metagenomics studies
    Authors:
    Agnieszka Felczykowska, Anna Krajewska, Sylwia Zielińska, Joanna M. Łoś
    Academic press:
    Acta Biochimi. Pol. (rok: 2015, tom: 62, strony: brak), Wydawca: Polskie Towarzystwo Biochemiczne
    Status:
    Published
    DOI:
    brak - link to the publication
  7. Environmental DNA as a valuable and unique source of information about ecological networks in Arctic terrestrial ecosystems
    Authors:
    Sylwia Zielińska, Dorota Kidawa, Lech Stempniewicz, Marcin Łoś, Joanna M. Łoś
    Academic press:
    Environmental Reviews (rok: 2017, tom: nie dotyczy, strony: nie dotyczy), Wydawca: NRC Research Press
    Status:
    Accepted for publication
    DOI:
    10.1139/er-2016-0060 - link to the publication
  1. Advantages and disadvantages of metagenomic approaches – the young scientist point of view
    Authors:
    S. Zielińska, M. Łoś, J.M. Łoś
    Conference:
    BioTech Conference (rok: 2014, ), Wydawca: Politechnika Gdańska
    Data:
    konferencja 04-05.07
    Status:
    Published
  2. Cellulolytic bacteria from digestive tract of Svalbard reindeer (Rangifer tarandus platyrhynchus)
    Authors:
    Sylwia Zielińska, Dorota Kidawa, Lech Stempniewicz, Marcin Łoś, Joanna M. Łoś
    Conference:
    6th International Weigl Conference on Microbiology (rok: 2015, ), Wydawca: brak
    Data:
    konferencja 8-10.07
    Status:
    Published
  3. Possible problems that young scientist can meet when extracting DNA from soil sample
    Authors:
    S. Zielińska, M. Łoś, J.M. Łoś
    Conference:
    BioTech Conference (rok: 2014, ), Wydawca: Politechnika Gdańska
    Data:
    konferencja 04-05.07
    Status:
    Published
  4. Soil and feces as a valuable source of information about Arctic ecosystem
    Authors:
    Sylwia Zielińska
    Conference:
    International Sopot Youth Conference (rok: 2016, ), Wydawca: brak
    Data:
    konferencja 20.05.
    Status:
    Published
  5. Metagenomic approaches as tool to finding the origin of replication directly from enviromental samples
    Authors:
    S. Zielińska
    Conference:
    7th International Conference of PhD Students of Szczecin University (rok: 2014, ), Wydawca: Uniwersytet Szczeciński
    Data:
    konferencja 17,1
    Status:
    Published
  6. Applications, advantages and disadvantages of metagenomic approaches
    Authors:
    Sylwia Zielińska, Marcin Łoś, Joanna M. Łoś
    Conference:
    Symbiose, 18th Symposium for Biology Students in Europe (rok: 2015, ), Wydawca: brak
    Data:
    konferencja 23-31.07
    Status:
    Published
  7. Novel methods for extraction and purification of plasmid DNA from aquatic environments
    Authors:
    Aleksandra Małachowska, Anna Krajewska, Marcin Łoś, Joanna M. Łoś
    Conference:
    6th International Weigl Conference on Microbiology (rok: 2015, ), Wydawca: brak
    Data:
    konferencja 8-10.07
    Status:
    Published

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