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Construction of multi-state DNA computer working with more than one restriction enzymes

2011/01/B/NZ2/03022

Keywords

Descriptors

  • NZ2_8: Biologia obliczeniowa
  • NZ2_7: Bioinformatyka
  • ST6_7: Teoretyczne podstawy informatyki, w tym informatyka kwantowa

Panel

NZ2 – Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution

Uniwersytet Łódzki, Wydział Biologii i Ochrony Środowiska

Voivodeship: łódzkie

Other projects carried out by the institution »

Principal investigator (from the host institution)

dr hab. Tomasz Popławski

Number of co-investigators in the project: 6

Call

OPUS 1 – announced on 2011-03-15

Amount awarded
260 000 PLN
Project start date
2011-12-07
Project end date
2014-12-06
Project duration
36 months (the same as in the proposal)
Project status
Project settled

Equipment purchased [PL]

  1. Inkubator z wytrząsaniem. Cost: 20 000 PLN

Information in the final report

Publication in academic press/journals (5)

  1. Autonomous Push - down Automaton Built on DNA

    Authors:
    Tadeusz Krasiński, Sebastian Sakowski, Tomasz Popławski
    Academic press:
    Informatica (year: 2012, volume: 36, pages: 263-276), Publisher: Slovenian Society Informatika
    Status:
    Published

  2. Wnioskowanie logiczne przy użyciu DNA

    Authors:
    Błasiak J., Krasiński T., Rogowski Ł., Sakowski S., Popławski T.
    Academic press:
    Postępy Biologii Komórki (year: 2013, volume: 40, pages: 645-658), Publisher: Fundacja Biologii Komórki
    Status:
    Published

  3. Arithmetical analysis of biomolecular finite automaton

    Authors:
    Krasiński T., Sakowski S., Waldmajer J., Popławski T.
    Academic press:
    Fundamenta Informaticae (year: 2013, volume: 128(4), pages: 463-474), Publisher: IOS Press
    Status:
    Published
    DOI:
    10.3233/FI-2013-953 – link to the publication

  4. A detailed experimental study of a DNA computer with two endonucleases

    Authors:
    Sebastian Sakowski, Tadeusz Krasiński, Joanna Sarnik, Janusz Blasiak, Jacek Waldmajer and Tomasz Poplawski
    Academic press:
    Z Naturforsch C. (year: 2017, volume: -, pages: -), Publisher: De Gruyter
    Status:
    Published
    DOI:
    10.1515/znc-2016-0137 – link to the publication

  5. Biomolecular computer with multiple restriction enzymes

    Authors:
    Sebastian Sakowski, Tadeusz Krasiński, Jacek Waldmajer, Joanna Sarnik, Janusz Błasiak, Tomasz Popławski
    Status:
    Accepted for publication

Articles in post-conference publications (5)

  1. Logical inference based on DNA.

    Authors:
    Błasiak J., Krasiński T., Rogowski Ł., Sakowski S., Popławski T.
    Conference:
    Twenty National Conference on Applications of Mathematics in Biology and Medicine. (year: 2014, pages: 103-104), Publisher: Institute of Applied Mathematics and Mechanics, Uniwersity of Warsaw
    Date:
    conference 23-27 September
    Status:
    Published
    DOI:
    link to the publication

  2. Arithmetical analysis of biomolecular finite automaton.

    Authors:
    Krasiński T., Sakowski S., Waldmajer J., Popławski T.
    Conference:
    Nineteen National Conference on Applications of Mathematics in Biology and Medicine. (year: 2013, pages: 105), Publisher: Department of Physics and Biophysics, Medical University of Gdańsk
    Date:
    conference 16-20 September
    Status:
    Published
    DOI:
    link to the publication

  3. Autonomous push-down automaton built on DNA.

    Authors:
    Krasiński T., Sakowski S., Popławski T.
    Conference:
    Eighteenth National Conference on Applications of Mathematics in Biology and Medicine. (year: 2012, pages: 164-165), Publisher: Department of Probability and Biomathematics, Gdansk University of Technology
    Date:
    conference 23-27 September
    Status:
    Published

  4. Construction of biomolecular computer with DNA and restrictions enzymes.

    Authors:
    Sarnik J., Sakowski S., Błasiak J., Krasiński T., Popławski T
    Conference:
    Congress of the Polish Biochemistry, Cell Biology, Biophysics and Bioinformatics (year: 2014, pages: 96), Publisher: Polish Biochemical Society and of the Committee of Biochemistry and Biophysics Polish Academy of Sciences
    Date:
    conference 9-12 September
    Status:
    Published
    DOI:
    link to the publication

  5. Towards an autonomous multistate biomolecular devices built on DNA

    Authors:
    Krasiński T., Sakowski S., Popławski T.
    Conference:
    The Sixth World Congress on Nature and Biologically Inspired Computing (year: 2014, pages: 23 - 28), Publisher: IEEE
    Date:
    conference July 30, 31 - August 1
    Status:
    Published

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