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Information on the principal investigator and host institution

Information of the project and the call

Keywords

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Copy number polymorphism as a major mechanism influencing variability of plant genomes. Endogenous (RNA interference) and exogenous (stress) factors affecting the frequency and location of copy number variation events.

2011/01/B/NZ2/04816

Keywords:

genetic variation copy number polymorphism RNA interference stress

Descriptors:

  • NZ2_1: Molecular genetics

Panel:

NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution :

Instytut Chemii Bioorganicznej PAN

woj. wielkopolskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

prof. Marek Figlerowicz 

Number of co-investigators in the project: 7

Call: OPUS 1 - announced on 2011-03-15

Amount awarded: 585 000 PLN

Project start date (Y-m-d): 2011-12-07

Project end date (Y-m-d): 2015-06-06

Project duration:: 42 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. Komora do hodowli roślin E41L2 (95 000 PLN)

Information in the final report

  • Publication in academic press/journals (5)
  • Articles in post-conference publications (2)
  1. Transcriptome sequencing: next generation approach to RNA functional analysis
    Authors:
    Agnieszka Żmieńko, Paulina Jackowiak, Marek Figlerowicz
    Academic press:
    BioTechnologia (rok: 2011, tom: 92, strony: 311-319), Wydawca: Ośrodek Wydawnictw Naukowych (OWN)
    Status:
    Published
    DOI:
    nie - link to the publication
  2. An MLPA-Based Strategy for Discrete CNV Genotyping: CNV-miRNAs as an Example
    Authors:
    Malgorzata Marcinkowska-Swojak, Barbara Uszczynska, Marek Figlerowicz, Piotr Kozlowski
    Academic press:
    Human Mutation (rok: 2013, tom: 34, strony: 763-773), Wydawca: WILEY-BLACKWELL
    Status:
    Published
    DOI:
    10.1002/humu.22288 - link to the publication
  3. Nonallelic homologous recombination underlies recurrent multiallelic gene copy number variation in Arabidopsis thaliana
    Authors:
    Agnieszka Zmienko, Anna Samelak-Czajka, Piotr Kozlowski, Maja Szymanska, Marek Figlerowicz
    Academic press:
    PLOS Genetics (rok: 2016, ), Wydawca: The Public Library of Science (PLOS)
    Status:
    Submitted
    DOI:
    brak - link to the publication
  4. An MLPA-based approach for high-resolution genotyping of disease-related multi-allelic CNVs
    Authors:
    Malgorzata Marcinkowska-Swojak, Katarzyna Klonowska, Marek Figlerowicz, Piotr Kozlowski
    Academic press:
    Gene (rok: 2014, tom: 546, strony: 257-262), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.gene.2014.05.072 - link to the publication
  5. Copy number polymorphism in plant genomes
    Authors:
    Agnieszka Żmieńko, Anna Samelak, Piotr Kozłowski, Marek Figlerowicz
    Academic press:
    Theoretical and Applied Genetics (rok: 2014, tom: 127, strony: 45309), Wydawca: Springer
    Status:
    Published
    DOI:
    10.1007/s00122-013-2177-7 - link to the publication
  1. Copy number variation in Arabidopsis thaliana genome.
    Authors:
    A. Samelak, A. Żmieńko, M. Szymański, P. Kozłowski, WT Karłowski, M. Figlerowicz
    Conference:
    6th CONFERENCE OF THE POLISH SOCIETY OF EXPERIMENTAL PLANT BIOLOGY (rok: 2013, ), Wydawca: Ośrodek Wydawnictw Naukowych (OWN)
    Data:
    konferencja 16-19.09.2013
    Status:
    Published
  2. The extent of gene copy number variation in natural populations of Arabidopsis thaliana
    Authors:
    Agnieszka Żmieńko, Anna Samelak-Czajka, Małgorzata Marcinkowska-Swojak, Maciej Szymański, Wojciech M. Karłowski, Piotr Kozłowski, Marek Figlerowicz
    Conference:
    BIO 2014 Congress (rok: 2014, ), Wydawca: Polish Biochemical Society
    Data:
    konferencja 09-12.09.2014
    Status:
    Published
    DOI:
    link to the publication

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