Projects funded by the NCN
Establishing of a pyrosequencing pipeline for DNA methylation analysis.
2011/01/D/NZ2/00095
Keywords:
DNA methylation pirosequencing tumor supressor genes tumor genetics
Descriptors:
- NZ2_2: Genomics, transcriptomics, epigenomics
- NZ2_1: Molecular genetics
Panel:
NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology
Host institution :
Instytut Genetyki Człowieka PAN
woj. wielkopolskie
Principal investigator (from the host institution):
Number of co-investigators in the project: 3
Call: SONATA 1 - announced on 2011-03-15
Amount awarded: 890 500 PLN
Project start date (Y-m-d): 2011-12-06
Project end date (Y-m-d): 2014-12-05
Project duration:: 36 months (the same as in the proposal)
Project status: Project settled
Equipment purchased [PL]
- Miniwirówka, BIONOVO (1 000 PLN)
- Termocykler, BIO-RAD (40 000 PLN)
- Urządzenie do ciągłego monitoringu hodowli komórkowych (69 467 PLN)
- Vortex (1 000 PLN)
- Komora PCR, POLGEN (8 000 PLN)
- Lodówko-zamrażarka, EURO-NET (2 000 PLN)
- System do sekwencjonowania, SYNGEN (344 000 PLN)
- Zestaw pipet oraz drobny sprzęt laboratoryjny (14 000 PLN)
Information in the final report
- Publication in academic press/journals (2)
- Book publications / chapters in book publications (1)
- Recurrent epigenetic silencing of the PTPRD tumor suppressor in laryngeal squamous cell carcinomaAuthors:Szaumkessel M, Wojciechowska S, Janiszewska J, Zemke N, Byzia E, Kiwerska K, Kostrzewska-Poczekaj M, Ustaszewski A, Jarmuż-Szymczak M, Grenman R, Wierzbicka M, Bartochowska A, Szyfter K, and Giefing M.Academic press:Tumor Biology (tom: -, strony: -), Wydawca: SpringerStatus:Accepted for publicationDOI:brak - link to the publication
- The PRDX2 gene is transcriptionally silenced and de novo methylated in Hodgkin and Reed-Sternberg cells of classical Hodgkin lymphoma.Authors:Schneider M, Szaumkessel M, Richter J, Ammerpohl O, Hansmann ML, Küppers R, Siebert R, Giefing M.Academic press:Blood (rok: 2014, tom: 123, strony: 3672-3674), Wydawca: American Society of Hematology (United States)Status:PublishedDOI:10.1182/blood-2014-02-553263 - link to the publication
- Metoda pirosekwencjonowania w badaniu nowotworów.Authors:Byzia E, Giefing M.Book:Na Pograniczu Chemii i Biologii (rok: 2014, tom: XXXII, strony: 205-223), Wydawca: Wydawnictwo Naukowe Uniwersytetu Adama Mickiewicza w Poznaniu.Status:Published