Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

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Epigenetic regulation of in vitro culture plant regeneration - a role of histone acetylation in somatic embryogenesis induction.

2017/25/B/NZ1/01615

Keywords:

histone acethylation Arabidopsis thaliana epigenetic regulation Hordeum vulgare RNA-Seq somatic embriogenesis trichostatin A

Descriptors:

  • NZ2_2: Genomics, transcriptomics, epigenomics
  • NZ1_9: Biotechnology
  • NZ1_1: Molecular biology

Panel:

NZ1 - Molecular biology, structural biology, biotechnology: molecular biology, structural biology, biotechnology

Host institution :

Uniwersytet Śląski w Katowicach, Wydział Nauk Przyrodniczych

woj. śląskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

prof. Małgorzata Gaj 

Number of co-investigators in the project: 9

Call: OPUS 13 - announced on 2017-03-15

Amount awarded: 1 565 530 PLN

Project start date (Y-m-d): 2018-02-07

Project end date (Y-m-d): 2022-08-06

Project duration:: 54 months (the same as in the proposal)

Project status: Project settled

Project description

Download the project description in a pdf file

Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Equipment purchased [PL]

  1. Dysk zewnętrzny 5TB.
  2. Wirówka (10 000 PLN)
  3. Worteks (2 szt.) (2 000 PLN)
  4. Zamrażarka niskotemperaturowa (50 000 PLN)
  5. Inkubator (11 000 PLN)
  6. Laptop (10 000 PLN)
  7. Płyta grzewcza.
  8. Klamry do inkubatora.
  9. Miniwirówka.
  10. Pojemnik na ciekły azot (7 000 PLN)
  11. Router.

Information in the final report

  • Publication in academic press/journals (8)
  • Articles in post-conference publications (1)
  1. Trichostatin A Triggers an Embryogenic Transition in Arabidopsis Explants via an Auxin-Related Pathway
    Authors:
    Barbara Wójcikowska, Malwina Botor, Joanna Morończyk, Anna Maria Wójcik, Tomasz Nodzyński, Jagna Karcz, Małgorzata D. Gaj
    Academic press:
    Frontiers in Plant Science (rok: 2018, tom: 1,31458333333333, strony: nie dotyczy), Wydawca: Frontiers in
    Status:
    Published
    DOI:
    10.3389/fpls.2018.01353 - link to the publication
  2. Epigenetic regulation of auxin-induced somatic embryogenesis in plants
    Authors:
    Barbara Wójcikowska, Anna Maria Wójcik, Małgorzata Danuta Gaj
    Academic press:
    International Journal of Molecular Sciences (rok: 2020, tom: 21, strony: 45314), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms21072307 - link to the publication
  3. Insights into the histone acetylation-mediated regulation of the transcription factor genes that control the embryogenic transition in the somatic cells of Arabidopsis
    Authors:
    Joanna Morończyk, Agnieszka Brąszewska, Barbara Wójcikowska, Karolina Chwiałkowska, Katarzyna Nowak, Anna Maria Wójcik, Mirosław Kwaśniewski, Małgorzata Danuta Gaj
    Academic press:
    Cells (rok: 2022, tom: 11, strony: 45318), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/cells11050863 - link to the publication
  4. miR172 regulates WUS during somatic embryogenesis in Arabidopsis via AP2
    Authors:
    Katarzyna Nowak, Joanna Morończyk, Małgorzata Grzyb, Aleksandra Szczygieł-Sommer, Małgorzata Danuta Gaj
    Academic press:
    Cells (rok: 2022, tom: 11, strony: 45313), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/cells11040718 - link to the publication
  5. AGL15 controls the embryogenic reprogramming of somatic cells in Arabidopsis through the histone acetylation-mediated repression of the miRNA biogenesis genes.
    Authors:
    Katarzyna Nowak, Joanna Morończyk, Anna Maria Wójcik, Małgorzata Danuta Gaj
    Academic press:
    International Journal of Molecular Sciences (rok: 2020, tom: 21, strony: 45311), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms21186733 - link to the publication
  6. Current perspectives on the auxin-mediated genetic network that controls the induction of somatic embryogenesis in plants
    Authors:
    Anna Maria Wójcik, Barbara Wójcikowska, Małgorzata Danuta Gaj
    Academic press:
    International Journal of Molecular Sciences (rok: 2020, tom: 21, strony: 45310), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms21041333 - link to the publication
  7. Hypermethylation of auxin-responsive motifs in the promoters of the transcription factor genes accompanies the somatic embryogenesis induction in Arabidopsis
    Authors:
    Daria Grzybkowska, Katarzyna Nowak, Małgorzata Danuta Gaj
    Academic press:
    International Journal of Molecular Sciences (rok: 2020, tom: 21, strony: 45313), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms21186849 - link to the publication
  8. Research tools for the functional genomics of plant miRNAs during zygotic and somatic embryogenesis.
    Authors:
    Anna Maria Wójcik
    Academic press:
    International Journal of Molecular Sciences (rok: 2020, tom: 21, strony: 45315), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/ijms21144969 - link to the publication
  1. LEAFY COTYLEDON2 gene–a central regulator of the auxin-induced somatic embryogenesis in Arabidopsis.
    Authors:
    Wójcikowska Barbara, Małgorzata Danuta Gaj
    Conference:
    XI Conference In Vitro Cultures In Biotechnology and Plant Physiology" (rok: 2019, ), Wydawca: The Acta Biologica Cracoviensia Series Botanica, Polish Academy of Sciences and the Jagiellonian University
    Data:
    konferencja 04-06.12
    Status:
    Published

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