Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

Delete all

Determination of the influence of 5' end of RNA modifications and nucleotide or amino acid sequence on the electrostatic interaction energy of IFIT proteins with RNA

2016/21/N/ST4/03722

Keywords:

electrostatic interaction energy electron density IFIT proteins RNA

Descriptors:

  • ST4_15: Colloid chemistry
  • ST4_4: Theoretical and computational chemistry
  • ST4_13: Solid-state chemistry, surface physicochemistry

Panel:

ST4 - Chemistry: physical chemistry/chemical physics, theoretical chemistry, analytical chemistry, inorganic chemistry, organic chemistry, method development

Host institution :

Uniwersytet Warszawski, Wydział Chemii

woj. mazowieckie

Other projects carried out by the institution 

Principal investigator (from the host institution):

Urszula Budniak 

Number of co-investigators in the project: 2

Call: PRELUDIUM 11 - announced on 2016-03-15

Amount awarded: 143 800 PLN

Project start date (Y-m-d): 2017-02-17

Project end date (Y-m-d): 2022-02-16

Project duration:: 60 months (the same as in the proposal)

Project status: Project settled

Project description

Download the project description in a pdf file

Note - project descriptions were prepared by the authors of the applications themselves and placed in the system in an unchanged form.

Equipment purchased [PL]

  1. Zestaw komputerowy (13 000 PLN)
  2. laptop.

Information in the final report

  • Publication in academic press/journals (2)
  • Articles in post-conference publications (5)
  1. Electrostatic interactions of IFIT1 proteins with RNA having various 5'ends
    Authors:
    Urszula Anna Budniak, Paulina Maria Dominiak*
    Academic press:
    The Journal of Physical Chemistry B (rok: 2023, ), Wydawca: American Chemical Society
    Status:
    Submitted
    DOI:
    brak - link to the publication
  2. The Role of Electrostatic Interactions in IFIT5-RNA Complexes Predicted by the UBDB+EPMM Method
    Authors:
    Urszula Anna Budniak, Natalia Katarzyna Karolak, Marta Kulik, Krzysztof Młynarczyk, Maria Wiktoria Górna* and Paulina Maria Dominiak*
    Academic press:
    The Journal of Physical Chemistry B (rok: 2022, tom: 126, strony: 9152-9167), Wydawca: American Chemical Society
    Status:
    Published
    DOI:
    10.1021/acs.jpcb.2c04519 - link to the publication
  1. The influence of nucleotide sequence of RNA 5′ end on the electrostatic interaction energy of IFIT5 proteins with RNA
    Authors:
    U. Budniak and P. Dominiak
    Conference:
    31st European Crystallographic Meeting, 22-27.08.2018, Oviedo, Hiszpania (rok: 2018, ), Wydawca: IUCr Jurnals
    Data:
    konferencja 43334
    Status:
    Published
  2. UBDB databank as a tool for investigating electrostatic interactions between proteins and RNA
    Authors:
    Urszula A. Budniak, Paulina M. Dominiak
    Conference:
    Prof. Krzysztof W. Szewczyk's VII Intercollegiate Biotechnology Symposium SYMBIOZA (rok: 2018, ), Wydawca: Uniwersytet Warszawski, Wydział Biologii
    Data:
    konferencja 11-13.05.2018
    Status:
    Published
  3. Analysis of electrostatic interaction energies in complexes of IFIT5 proteins with RNA via UBDB+EPMM method
    Authors:
    U. A. Budniak and P. M. Dominiak
    Conference:
    School on Electron Crystallography (rok: 2021, ), Wydawca: IUCr Journals
    Data:
    konferencja 11-13.08.2021
    Status:
    Published
  4. The role of electrostatic interactions in IFIT proteins complexed with RNA with different 5′ end predicted by the UBDB+EPMM method
    Authors:
    U. Budniak and P. Dominiak
    Conference:
    32nd European Crystallographic Meeting, 18-23.08.2019, Wiedeń, Austria (rok: 2019, ), Wydawca: IUCr Jurnals
    Data:
    konferencja 18-23.09.2019
    Status:
    Published
  5. UBDB+EPMM approach as a tool for investigating electrostatic interactions between proteins and RNA
    Authors:
    U. Budniak , P. Dominiak
    Conference:
    33rd European Crystallographic Meeting, 23-27.08.2022, Versailles, Francja (rok: 2022, ), Wydawca: IUCr Journals
    Data:
    konferencja 23-27.08.2022
    Status:
    Published

O Narodowym Centrum Nauki

Finansowanie nauki

Współpraca zagraniczna

Centrum prasowe

Deklaracja dostępności
Przetwarzanie danych osobowych
Polityka cookies

Partnerzy