Projects funded by the NCN


Information on the principal investigator and host institution

Information of the project and the call

Keywords

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Wykorzystanie metod uczenia maszynowego w zadaniach komputerowo wspomaganego projektowania leków.

2015/16/T/NZ2/00058

Keywords:

Descriptors:

  • NZ2_7: Bioinformatics
  • NZ7_14: Pharmacy, pharmacotherapy, pharmacology
  • NZ2_8: Computational biology

Panel:

NZ2 - Genetics, genomics: molecular genetics, genomics, proteomics, bioinformatics, systems biology, genetic epidemiology

Host institution :

Instytut Farmakologii PAN

woj. małopolskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

Sabina Podlewska 

Number of co-investigators in the project: 2

Call: ETIUDA 3 - announced on 2014-12-15

Amount awarded: 76 476 PLN

Project start date (Y-m-d): 2015-10-01

Project end date (Y-m-d): 2016-09-30

Project duration:: 12 months (the same as in the proposal)

Project status: Project settled

Information in the final report

  • Publication in academic press/journals (4)
  • Articles in post-conference publications (3)
  1. Structural modifications of the serotonin 5-HT7 receptor agonist N-(4-cyanophenylmethyl)-4-(2-biphenyl)-1-piperazinehexanamide (LP-211) to improve in vitro microsomal stability: A case study
    Authors:
    Lacivita, E.; Podlewska, S.; Speranza, L.; Niso, M.; Satała, G.; Perrone, R.; Perrone-Capano, C.; Bojarski, A. J.; Leopoldo, M.
    Academic press:
    European Journal of Medicinal Chemistry (rok: 2016, tom: 120, strony: 363-379), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.ejmech.2016.05.005 - link to the publication
  2. Rational design in search for 5-phenylhydantoin selective 5-HT7R antagonists. Molecular modeling, synthesis and biological evaluation
    Authors:
    Kucwaj-Brysz, K.; Warszycki, D.; Podlewska, S.; Witek, J.; Witek, K.; González Izquierdo, A.; Satała, G.; Loza, M.I.; Lubelska, A.; Latacz, G.; Bojarski, A.J.; Castro, M.; Kieć-Kononowicz, K.; Handzlik, J.
    Academic press:
    European Journal of Medicinal Chemistry (rok: 2016, tom: 112, strony: 258-269), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.ejmech.2016.02.024 - link to the publication
  3. Extremely Randomized Machine Learning Methods for Compound Activity Prediction
    Authors:
    Czarnecki, W.M.; Podlewska, S.; Bojarski, A.J.
    Academic press:
    Molecules (rok: 2015, tom: 20, strony: 20107-20117), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/molecules201119679 - link to the publication
  4. Substructural Connectivity Fingerprint and Extreme Entropy Machines-A New Method of Compound Representation and Analysis
    Authors:
    Rataj, K.; Czarnecki, W.; Podlewska, S.; Pocha, A.; Bojarski, A.J.
    Academic press:
    Molecules (rok: 2018, tom: 23, strony: E1242), Wydawca: MDPI
    Status:
    Published
    DOI:
    10.3390/molecules23061242 - link to the publication
  1. Aminergic GPCRs from a site-directed mutagenesis perspective – analysis and prediction
    Authors:
    Podlewska, S.; Vass, M.; Kooistra, A.J.; Kafel, R.; Bojarski, A.J.; de Graaf, C.
    Conference:
    The 2nd Central European Biomedical Congress "From emerging biochemical strategies to personalized medicine" (rok: 2016, ), Wydawca: Instytut Farmakologii PAN/Uniwersytet Jagielloński
    Data:
    konferencja 15-18.06.2016
    Status:
    Published
  2. Zdefiniowanie wymagań strukturalnych dla selektywności pomiędzy wybranymi podtypami receptorów serotoninowych a receptorem histaminowym H1
    Authors:
    Podlewska, S.; Kooistra, A. J.; Vass, M.; Kafel, R.; Bojarski, A. J.; de Graaf, C.
    Conference:
    VI Konferencja Doktorantów Uniwersytetu Jagiellońskiego – Collegium Medicum (rok: 2016, ), Wydawca: Uniwersytet Jagielloński
    Data:
    konferencja 23.04.2016
    Status:
    Published
  3. Towards new 5-HT7R ligands with improved metabolic stability – synthesis of LP-211 derivatives and their comprehensive evaluation in silico and in vitro
    Authors:
    Lacivita, E.; Podlewska, S.; Speranza, L.; Niso, M.; Satała, G.; Perrone, R.; Perrone-Capano, C.; Bojarski, A.J.; Leopoldo, M.
    Conference:
    The 2nd Central European Biomedical Congress "From emerging biochemical strategies to personalized medicine" (rok: 2016, ), Wydawca: Instytut Farmakologii PAN/Uniwersytet Jagielloński
    Data:
    konferencja 15-18.06.2016
    Status:
    Published