Projects funded by the NCN

Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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Hydrodynamic interactions in biomolecular systems. Computational studies.

2014/13/B/NZ1/00004

Keywords:

hydrodynamic interactions Stokes equation mobility diffusion association molecular shape biomolecules

Descriptors:

  • NZ1_3: Biophysics
  • ST6_12: Scientific computing, simulation and modelling tools
  • ST3_16: Physics of biological systems

Panel:

NZ1 - Molecular biology, structural biology, biotechnology: molecular biology, structural biology, biotechnology

Host institution :

Uniwersytet Warszawski, Centrum Nowych Technologii Uniwersytetu Warszawskiego

woj. mazowieckie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr hab. Maciej Długosz 

Number of co-investigators in the project: 3

Call: OPUS 7 - announced on 2014-03-17

Amount awarded: 267 600 PLN

Project start date (Y-m-d): 2015-01-29

Project end date (Y-m-d): 2018-01-28

Project duration:: 36 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. komputerowa stacja robocza (5 596 PLN)

Information in the final report

  • Publication in academic press/journals (4)
  1. Effects of Spatially Dependent Mobilities on the Kinetics of the Diffusion-Controlled Association Derived from the First-Passage-Time Approach
    Authors:
    Maciej Długosz, Jan M. Antosiewicz
    Academic press:
    Journal of Physical Chemistry B (rok: 2016, tom: 120, strony: 7114-7127), Wydawca: ACS
    Status:
    Published
    DOI:
    10.1021/acs.jpcb.6b05281 - link to the publication
  2. Effects of Hydrodynamic Interactions on the Apparent 1D Mobility of a Nonspecifically Bound Protein Following a Helical Path around DNA
    Authors:
    Maciej Długosz
    Academic press:
    Journal of Physical Chemistry B (rok: 2015, tom: 119, strony: 14433-14440), Wydawca: ACS
    Status:
    Published
    DOI:
    10.102/acs.jpcb.5b08115 - link to the publication
  3. Hydrodynamic Steering in Protein Association Revisited: Surprisingly Minuscule Effects of Considerable Torques
    Authors:
    Jan M. Antosiewicz, Kamil Kamiński, Maciej Długosz
    Academic press:
    Journal of Physical Chemistry B (rok: 2017, tom: 121, strony: 8475-8491), Wydawca: ACS
    Status:
    Published
    DOI:
    10.1021/acs.jpcb.7b06053 - link to the publication
  4. Toward An Accurate Modeling of Hydrodynamic Effects on the Translational and Rotational Dynamics of Biomolecules in Many-Body Systems
    Authors:
    Maciej Długosz, Jan M. Antosiewicz
    Academic press:
    Journal of Physical Chemistry B (rok: 2015, tom: 119, strony: 8425-8439), Wydawca: ACS
    Status:
    Published
    DOI:
    10.102/acs.jpcb.5b04675 - link to the publication

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