Projects funded by the NCN


Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

Delete all

The genome of the model cestode Hymenolepis diminuta - the missing link of modern experimental parasitology.

2014/13/B/NZ6/00881

Keywords:

Hymenolepis diminuta Cestoda genome sequencing comparative analysis adaptations marker genes

Descriptors:

  • NZ6_6: Parasitology
  • NZ6_8: Other related subjects

Panel:

NZ6 - Human and animal immunology and infection: immunity, immune disorders, immunotherapy, infectious and invasive diseases, microbiology, transplantology, allergology

Host institution :

Warszawski Uniwersytet Medyczny, I Wydział Lekarski

woj. mazowieckie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr hab. Daniel Młocicki 

Number of co-investigators in the project: 6

Call: OPUS 7 - announced on 2014-03-17

Amount awarded: 525 340 PLN

Project start date (Y-m-d): 2015-02-09

Project end date (Y-m-d): 2019-02-08

Project duration:: 48 months (the same as in the proposal)

Project status: Project settled

Information in the final report

  • Publication in academic press/journals (2)
  • Articles in post-conference publications (3)
  1. De novo assembly of bacterial genomes with repetitive DNA regions by dnaasm application
    Authors:
    Kuśmirek W., Nowak R.
    Academic press:
    BMC Bioinformatics (rok: 2018, tom: 0,98125, strony: 0,98125), Wydawca: BMC
    Status:
    Published
    DOI:
    10.1186/s12859-018-2281-4 - link to the publication
  2. Hybrid de novo whole-genome assembly and annotation of the model tapeworm Hymenolepis diminuta.
    Authors:
    Nowak RM, Jastrzębski JP, Kuśmirek W, Sałamatin R, Rydzanicz M, Sobczyk-Kopcioł A, Sulima-Celińska A, Paukszto Ł, Makowczenko KG, Płoski R, Tkach VV, Basałaj K, Młocicki D.
    Academic press:
    Scientific Data (rok: 2019, tom: 0,459722222222222, strony: 45305), Wydawca: Nature Publishing Group
    Status:
    Published
    DOI:
    10.1038/s41597-019-0311-3 - link to the publication
  1. Mitochondrial genomics of the tapeworm Hymenolepis hibernia
    Authors:
    RUSŁAN SAŁAMATIN, MAŁGORZATA RYDZANICZ, ROBERT NOWAK, WIKTOR KUŚMIREK, AGNIESZKA SOBCZYK-KOPCIOŁ, RAFAŁ PŁOSK, DANIEL MŁOCICKI
    Conference:
    XIIIth Czech and Slovak Parasitological Days (rok: 2018, ), Wydawca: Slovak Society for Parasitology
    Data:
    konferencja 21-25 maja 2018
    Status:
    Published
  2. Hybrid de novo assembly of the model tapeworm Hymenolepis diminuta genome
    Authors:
    KUŚMIREK WIKTOR, NOWAK ROBERT, RYDZANICZ MAŁGORZATA, PŁOSKI RAFAŁ, SAŁAMATIN RUSŁAN, SOBCZYK-KOPCIOŁ AGNIESZKA, MŁOCICKI DANIEL
    Conference:
    XIIIth Slovak and Czech Parasitological Days (rok: 2018, ), Wydawca: Slovak Society for Parasitology
    Data:
    konferencja 25-28 maja
    Status:
    Published
  3. MITOCHONDRIAL GENOMICS OF THE TAPEWORM HYMENOLEPIS DIMINUTA: COMPARATIVE CHARACTERISTICS OF THE HUMAN AND LABORATORY STRAINS
    Authors:
    Sałamatin R., Rydzanicz M., Nowak R., Kuśmirek W., Cielecka D., Sobczyk-Kopcioł A., Żarnowska-Prymek H., Płoski R., Młocicki D.
    Conference:
    XVI CONFERENCE OF UKRAINIAN SCIENTIFIC SOCIETY OF PARASITOLOGISTS (rok: 2017, ), Wydawca: NATIONAL ACADEMY OF SCIENCES OF UKRAINE I. I. Schmalhausen Institute of Zoology
    Data:
    konferencja 18–21 Września
    Status:
    Published