Projects funded by the NCN


Information on the principal investigator and host institution

Information of the project and the call

Keywords

Equipment

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eVOLUTUS: the simulator of multiscale evolutionary processes tested on Foraminifera

2013/09/B/ST10/01734

Keywords:

Foraminifera fossil record simulation evolution phenotype genotype population dynamics

Descriptors:

  • ST10_8: Paleontology, stratigraphy, geochronology
  • ST10_15: Paleoclimatology, paleoecology

Panel:

ST10 - Earth sciences: Earth system science, atmospheric sciences, climatology, geochemistry, geodesy, geoecology, geophysics, physical geography, geoinformatics, planetary geology, pedology, mining, chemical and physical oceanology, environmental protection

Host institution :

Akademia Górniczo-Hutnicza im. Stanisława Staszica w Krakowie, Wydział Informatyki, Elektroniki i Telekomunikacji

woj. małopolskie

Other projects carried out by the institution 

Principal investigator (from the host institution):

dr Paweł Topa 

Number of co-investigators in the project: 6

Call: OPUS 5 - announced on 2013-03-15

Amount awarded: 441 395 PLN

Project start date (Y-m-d): 2014-03-04

Project end date (Y-m-d): 2017-12-03

Project duration:: 45 months (the same as in the proposal)

Project status: Project settled

Equipment purchased [PL]

  1. Kompilator C++Builder XE4 Professional (4 730 PLN)
  2. upgrade kompilatora i środowiska programistycznego Borland C++ (5 688 PLN)
  3. CRUCIAL 8GB 1600MHz DDR3, POL-0000-08/15.
  4. Oprogramowanie do wizualizacji danych naukowych 3D - Amira (26 000 PLN)
  5. Samsung dysk SSD 850 EVO 250GB, POL-0000-08/16.
  6. Komputery mobilne (4 szt.) (15 200 PLN)

Information in the final report

  • Publication in academic press/journals (3)
  • Articles in post-conference publications (10)
  • Book publications / chapters in book publications (2)
  1. Multithreaded computing in evolutionary design and in artificial life simulations
    Authors:
    Maciej Komosinski, Szymon Ulatowski
    Academic press:
    The Journal of Supercomputing (rok: 2016, tom: 73, strony: 2214–2228), Wydawca: Springer
    Status:
    Published
    DOI:
    10.1007/s11227-016-1923-4 - link to the publication
  2. Modelling ecology and evolution of Foraminifera in the agent-oriented distributed platform
    Authors:
    Paweł Topa, Łukasz Faber, Jarosław Tyszka, Maciej Komosinski
    Academic press:
    Journal of Computational Science (rok: 2017, tom: 18, strony: 69-84), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.jocs.2016.07.009 - link to the publication
  3. Multi-agent simulation of benthic foraminifera response to annual variability of feeding fluxes
    Authors:
    Maciej Komosinski, Agnieszka Mensfelt, Jarosław Tyszka, Jan Goleń
    Academic press:
    Journal of Computational Science (rok: 2017, tom: 21, strony: 419-431), Wydawca: Elsevier
    Status:
    Published
    DOI:
    10.1016/j.jocs.2016.09.009 - link to the publication
  1. eVolutus: A Configurable Platform Designed for Ecological and Evolutionary Experiments Tested on Foraminifera
    Authors:
    Paweł Topa, Maciej Komosinski, Maciej Bassara, Jarosław Tyszka
    Conference:
    International Conference on Man–Machine Interactions 4, ICMMI 2015 (rok: 2015, ), Wydawca: Springer
    Data:
    konferencja 2015
    Status:
    Published
  2. Agent-oriented Foraminifera Habitat Simulation
    Authors:
    Maciej Kaziród, Wojciech Korczyński, Elias Fernandez, Aleksander Byrski, Marek Kisiel-Dorohinicki, Pawel Topa, Jaroslaw Tyszka, Maciej Komosiński
    Conference:
    International Conference on Computational Science ICCS 2015 (rok: 2015, ), Wydawca: Elsevier
    Data:
    konferencja 1-3 June, 2015
    Status:
    Published
  3. Application of a Morphological Similarity Measure to the Analysis of Shell Morphogenesis in Foraminifera
    Authors:
    Maciej Komosinski, Agnieszka Mensfelt, Paweł Topa, Jarosław Tyszka
    Conference:
    International Conference on Man–Machine Interactions 4, ICMMI 2015 (rok: 2015, ), Wydawca: Springer
    Data:
    konferencja October 6-9, 2015
    Status:
    Published
  4. Chamber formation in globothalamean Foraminifera: from theoretical models to cytoskeleton staining experiments
    Authors:
    Jaroslaw Tyszka, Ulf Bickmeyer, Markus Raitzsch, Jelle Bijma, Paweł Topa, Karina Kaczmarek, Antje Mewes
    Conference:
    The Batsheva de Rothschild Workshop on Live foraminifera (rok: 2016, ), Wydawca: The Israel Academy of Sciences and Humanities
    Data:
    konferencja 10-16 wrzesień 2016
    Status:
    Published
  5. Crossing scales in modelling of foraminifera
    Authors:
    Jarosław Tyszka, Maciej Komosiński, Paweł Topa, Sebastian Rokitta
    Conference:
    Foraminifera and Nannofossil Groups Joint Spring Meeting 2014 (rok: 2014, ), Wydawca: NIOZ Royal Netherlands Institute for Sea Research
    Data:
    konferencja 2014
    Status:
    Published
  6. Tournament-based convection selection in evolutionary algorithms
    Authors:
    Maciej Komosinski i Konrad Miazga
    Conference:
    Parallel Processing and Applied Mathematics PPAM 2017 (rok: 2018, ), Wydawca: Springer
    Data:
    konferencja 10-13 September 2017
    Status:
    Published
  7. Towards Multi-Agent simulations accelerated using GPU
    Authors:
    Kamil Piętak and Paweł Topa
    Conference:
    Parallel Processing and Applied Mathematics PPAM 2017 (rok: 2018, ), Wydawca: Springer
    Data:
    konferencja 10-13 September 2017
    Status:
    Published
  8. eVolutus: A new platform for evolutionary experiments
    Authors:
    Paweł Topa, Maciej Komosiński, Jarosław Tyszka, Agnieszka Mensfelt, Sebastian Rokitta, Maciej Bassara
    Conference:
    Parallel Processing and Applied Mathematics PPAM 2015 (rok: 2016, ), Wydawca: Springer
    Data:
    konferencja October 6-9, 2015
    Status:
    Published
  9. Constructing models of movement and sensing behaviour in foraminifera
    Authors:
    Jan Golen, Jarosław Tyszka, Maciej Komosinski, Agnieszka Mensfelt, Paweł Topa
    Conference:
    The Batsheva de Rothschild Workshop on Live foraminifera (rok: 2016, ), Wydawca: The Israel Academy of Sciences and Humanities
    Data:
    konferencja 10-16 wrzesień 2016
    Status:
    Published
  10. Multi-Agent Systems programmed visually with Google Blockly
    Authors:
    Szymon Górowski, Robert Maguda and Paweł Topa
    Conference:
    Parallel Processing and Applied Mathematics PPAM 2017 (rok: 2018, ), Wydawca: Springer
    Data:
    konferencja 10-13 September 2017
    Status:
    Published
  1. Properties of genealogical trees, their correlation with parameters of evolutionary algorithms, and models of parent-child rank co-occurrence
    Authors:
    Konrad Miazga
    Book:
    Raport techniczny (rok: 2017, tom: RA-10/17, strony: 45302), Wydawca: Instytut Informatyki, Politechnika Poznańska
    Status:
    Published
  2. Narzędzia akwizycji, analizy i prezentacji danych pochodzących z symulacji dynamiki populacji i zmian ewolucyjnych
    Authors:
    Paweł Topa, Michał Begejowicz, Maciej Gaweł, Michał Krężelewski, Łukasz Oliwa, Eryk Zimończyk, Bartosz Żurkowski, Bubula Beata, Ciechanowski Dariusz, Wójcik Anna
    Book:
    Raport techniczny (rok: 2017, tom: 42736, strony: 11689), Wydawca: Katedra Informatyki, Akademia Górniczo-Hutnicza
    Status:
    Published